RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 MARK2Q7KZI7 788 aaKnown RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ZFPM2Q8WW38 1151 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 FEM1CQ96JP0 617 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 MRGPRX3Q96LB0 322 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 PPP1R2P1Q96PQ5 205 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 RANBP9Q96S59 729 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 FAM83CQ9BQN1 747 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 CINPQ9BW66 212 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TDRD1Q9BXT4 1180 aaKnown RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF180Q9UJW8 692 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TCAF1Q9Y4C2 921 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 GOLGA6L10A6NI86 522 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TYROBPO43914 113 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 B3GALNT1O75752 331 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 EPOP01588 193 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ARSAP15289 507 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 PSMA3P25788 255 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TPP2P29144 1249 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 HPDP32754 393 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 RGS19P49795 217 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TRAF2Q12933 501 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF235Q14590 738 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TMED2Q15363 201 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 DHCR24Q15392 516 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 SMAD1Q15797 465 aaKnown RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 PCID2Q5JVF3 399 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ATXN7L2Q5T6C5 722 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TANGO2Q6ICL3 276 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ESRP1Q6NXG1 681 aaKnown RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 CROCCP2Q86T23 111 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 SLC25A41Q8N5S1 370 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ATXN2LQ8WWM7 1075 aaKnown RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 CERS2Q96G23 380 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 ZFYVE19Q96K21 471 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 MSLNLQ96KJ4 702 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 MYADMQ96S97 322 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 NAT9Q9BTE0 207 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-208ENST00000468300 BFARQ9NZS9 450 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 TBC1D14Q9P2M4 693 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 KCTD3Q9Y597 815 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 MTCH2Q9Y6C9 303 aa8.33□□□□□ -1.08
BRCA1-208ENST00000468300 MAGEB16A2A368 324 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 AURKAO14965 403 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 POLBP06746 335 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SRCP12931 536 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GABRB3P28472 473 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SCNN1BP51168 640 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GUCY1A3Q02108 690 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GABPB1Q06547 395 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 CDK18Q07002 472 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GALNT3Q14435 633 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 TERF2Q15554 542 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 CASC4Q6P4E1 433 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 VITQ6UXI7 678 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SLC26A11Q86WA9 606 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 PHTF2Q8N3S3 785 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 DCLK2Q8N568 766 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 DENND1AQ8TEH3 1009 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SMARCD2Q92925 531 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ACDQ96AP0 544 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 OTUB2Q96DC9 234 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 BBS2Q9BXC9 721 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 FSD1LQ9BXM9 530 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 HPS4Q9NQG7 708 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 C6orf203Q9P0P8 240 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GGT7Q9UJ14 662 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GGA2Q9UJY4 613 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 HS3ST2Q9Y278 367 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 RRP15Q9Y3B9 282 aaKnown RBP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 PCDHGC4Q9Y5F7 938 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SPO11Q9Y5K1 396 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 CCDC78A2IDD5 438 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 HOXC11O43248 304 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SIN3BO75182 1162 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 RFPL1O75677 317 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 IVLP07476 585 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF24P17028 368 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ACVR1Q04771 509 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 PTPRNQ16849 979 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GEN1Q17RS7 908 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 LRRC6Q86X45 466 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ZSWIM9Q86XI8 627 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SFTPA1Q8IWL2 248 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 CNTN4Q8IWV2 1026 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ACVR1CQ8NER5 493 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 MDGA1Q8NFP4 955 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 NSMCE1Q8WV22 266 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF669Q96BR6 464 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 EID2BQ96D98 161 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 RPL10LQ96L21 214 aaKnown RBP8.32□□□□□ -1.08
BRCA1-208ENST00000468300 CCDC77Q9BR77 488 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GDE1Q9NZC3 331 aa8.32□□□□□ -1.08
BRCA1-208ENST00000468300 GRID1Q9ULK0 1009 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms