RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 LRRC9Q6ZRR7 1453 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 ABHD14A-ACY1A0A1B0GW23 586 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 AGAP5A6NIR3 686 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 EFCAB8A8MWE9 144 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 PRSS1P07477 247 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 ITGA2BP08514 1039 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 PRKCHP24723 683 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 FMO4P31512 558 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 LIFRP42702 1097 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 CDK7P50613 346 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 OAZ1P54368 228 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 GALNT1Q10472 559 aaPredicted RBP3.78□□□□□ -1.8
XRN1-206ENST00000467077 ZBTB17Q13105 803 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 PPIGQ13427 754 aaKnown RBP eCLIP3.78□□□□□ -1.87e-6■■□□□ 12.3
XRN1-206ENST00000467077 PKP1Q13835 747 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 PUM3Q15397 648 aaKnown RBP3.78□□□□□ -1.8
XRN1-206ENST00000467077 ZC2HC1BQ5TFG8 222 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 SERPINA11Q86U17 422 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 SLC44A2Q8IWA5 706 aaPredicted RBP3.78□□□□□ -1.8
XRN1-206ENST00000467077 CADM4Q8NFZ8 388 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 ZNF599Q96NL3 588 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 NPAS1Q99742 590 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 CRB3Q9BUF7 120 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 LHPPQ9H008 270 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 SMARCAL1Q9NZC9 954 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 VDAC3Q9Y277 283 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 RTEL1-TNFRSF6BF6WH68 1400 aa3.78□□□□□ -1.8
XRN1-206ENST00000467077 KDM5AP29375 1690 aaKnown RBP3.78□□□□□ -1.81
XRN1-206ENST00000467077 LRP6O75581 1613 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 TMEM94Q12767 1356 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 MTUS2Q5JR59 1369 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 JCADQ9P266 1359 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 EIF2AK4Q9P2K8 1649 aaKnown RBP3.77□□□□□ -1.81
XRN1-206ENST00000467077 ABCC3O15438 1527 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 SLIT1O75093 1534 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 MAP3K1Q13233 1512 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 CCDC194A0A1B0GVG4 234 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 RNMTO43148 476 aaKnown RBP3.77□□□□□ -1.81
XRN1-206ENST00000467077 ACTL6BO94805 426 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 HLA-DQA2P01906 255 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 MARK3P27448 753 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 SERPINF1P36955 418 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 RCAN1P53805 252 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 GRIK2Q13002 908 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 TBRG1Q3YBR2 411 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 SETMARQ53H47 684 aaPredicted RBP3.77□□□□□ -1.81
XRN1-206ENST00000467077 SPINK14Q6IE38 97 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 NFRKBQ6P4R8 1299 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 KLHL24Q6TFL4 600 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 RAB11FIP2Q7L804 512 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 ZNF441Q8N8Z8 693 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 ATG16L2Q8NAA4 619 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 KCNH5Q8NCM2 988 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 ADAD2Q8NCV1 583 aaKnown RBP3.77□□□□□ -1.81
XRN1-206ENST00000467077 F2RL3Q96RI0 385 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 IFT27Q9BW83 186 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 FBRSL1Q9HCM7 1045 aaKnown RBP3.77□□□□□ -1.81
XRN1-206ENST00000467077 LRFN1Q9P244 771 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 HERC5Q9UII4 1024 aaKnown RBP3.77□□□□□ -1.81
XRN1-206ENST00000467077 DAPP1Q9UN19 280 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 PCDHA10Q9Y5I2 948 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 ERVK-7P63135 1459 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 MBD5Q9P267 1494 aa3.77□□□□□ -1.81
XRN1-206ENST00000467077 MSH6P52701 1360 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 CAMSAP2Q08AD1 1489 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 NCOA2Q15596 1464 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 CCDC141Q6ZP82 1450 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 TMEM247A6NEH6 219 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 ACKR2O00590 384 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 HEXIM1O94992 359 aaKnown RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 PNLIPRP1P54315 467 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 DSCR10P59022 87 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 ICA1Q05084 483 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 UBE4AQ14139 1066 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 TTC22Q5TAA0 569 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 LIN54Q6MZP7 749 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 KLHL17Q6TDP4 642 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 KIAA1324Q6UXG2 1013 aaKnown RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 CIARTQ8N365 385 aaPredicted RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 SCAMP5Q8TAC9 235 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 SLC39A13Q96H72 371 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 RMDN3Q96TC7 470 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 BRD8Q9H0E9 1235 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 PABPC3Q9H361 631 aaKnown RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 ELAC1Q9H777 363 aaKnown RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 PRDM8Q9NQV8 689 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 TAAR2Q9P1P5 351 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 SLC25A13Q9UJS0 675 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 C19orf53Q9UNZ5 99 aaPredicted RBP3.76□□□□□ -1.81
XRN1-206ENST00000467077 MROH1Q8NDA8 1641 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 ARHGEF5Q12774 1597 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 NWD1Q149M9 1564 aa3.76□□□□□ -1.81
XRN1-206ENST00000467077 PRDM15P57071 1507 aaPredicted RBP3.75□□□□□ -1.81
XRN1-206ENST00000467077 EHBP1L1Q8N3D4 1523 aa3.75□□□□□ -1.81
XRN1-206ENST00000467077 TET3O43151 1660 aa3.75□□□□□ -1.81
XRN1-206ENST00000467077 CDK12Q9NYV4 1490 aaPredicted RBP3.75□□□□□ -1.81
XRN1-206ENST00000467077 ARHGAP23Q9P227 1491 aa3.75□□□□□ -1.81
XRN1-206ENST00000467077 WEE2P0C1S8 567 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms