RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 OR6K2Q8NGY2 324 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 ELSPBP1Q96BH3 223 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 CHFRQ96EP1 664 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 TUBB6Q9BUF5 446 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 FICDQ9BVA6 458 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 POLR1EQ9GZS1 481 aaKnown RBP18.78■□□□□ 0.6
CAPN3-209ENST00000466222 SLCO1B3Q9NPD5 702 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 EIF2B3Q9NR50 452 aaKnown RBP18.78■□□□□ 0.6
CAPN3-209ENST00000466222 SLCO3A1Q9UIG8 710 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 FBXO10Q9UK96 956 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 C15orf41Q9Y2V0 281 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 IKBKGQ9Y6K9 419 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 DOCK4Q8N1I0 1966 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 HOXC11O43248 304 aaPredicted RBP18.77■□□□□ 0.6
CAPN3-209ENST00000466222 NFATC1O95644 943 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 IL1BP01584 269 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 PLK1P53350 603 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 WNT3AP56704 352 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 KDELC1Q6UW63 502 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 ETFBKMTQ8IXQ9 262 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 KLHDC8BQ8IXV7 354 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 DEFB123Q8N688 67 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 CYB5D2Q8WUJ1 264 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 SPOCK2Q92563 424 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 MGME1Q9BQP7 344 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 TNKS2Q9H2K2 1166 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 LHX3Q9UBR4 397 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 STK38LQ9Y2H1 464 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 TRIOO75962 3097 aa18.77■□□□□ 0.6
CAPN3-209ENST00000466222 C2CD4DB7Z1M9 353 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 ZNF821O75541 412 aaPredicted RBP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 MT-ND3P03897 115 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 GSTA2P09210 222 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 MGAT1P26572 445 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 GKP32189 559 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 DGKGP49619 791 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 EFTUD2Q15029 972 aaKnown RBP eCLIP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 DGKKQ5KSL6 1271 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 CERCAMQ5T4B2 595 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 DENND5AQ6IQ26 1287 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 LRRC8BQ6P9F7 803 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 YAF2Q8IY57 180 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 DNAAF3Q8N9W5 541 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 TCP10LQ8TDR4 215 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 SLC44A1Q8WWI5 657 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 ACDQ96AP0 544 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 MRRFQ96E11 262 aaKnown RBP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 SIGLEC10Q96LC7 697 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 PLAC1Q9HBJ0 212 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 AAR2Q9Y312 384 aaKnown RBP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 TEX264Q9Y6I9 313 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 BRWD1Q9NSI6 2320 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 TGDSO95455 350 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 FOSL2P15408 326 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 CR2P20023 1033 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 ADRA1AP35348 466 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 SOX9P48436 509 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 SERPINH1P50454 418 aaKnown RBP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 CDK16Q00536 496 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 SLC18A2Q05940 514 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 RUNX3Q13761 415 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 RFTN1Q14699 578 aaPredicted RBP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 PDGFRLQ15198 375 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 INO80DQ53TQ3 878 aaPredicted RBP18.76■□□□□ 0.59
CAPN3-209ENST00000466222 MBLAC2Q68D91 279 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 RETSATQ6NUM9 610 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 NLRP9Q7RTR0 991 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 SLC25A41Q8N5S1 370 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 TADA1Q96BN2 335 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 STAMBPL1Q96FJ0 436 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 APOPT1Q96IL0 206 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 NECTIN4Q96NY8 510 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 CXorf56Q9H5V9 222 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 LNPEPQ9UIQ6 1025 aa18.76■□□□□ 0.59
CAPN3-209ENST00000466222 PRRT4C9JH25 899 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 INSIG1O15503 277 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 MBTPS2O43462 519 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 ANXA9O76027 345 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 ANP32DO95626 131 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 INHBAP08476 426 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 DHRS4L1P0CG22 281 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 SRCP12931 536 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 ADRA1DP25100 572 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 CCNG1P51959 295 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 KIAA0907Q7Z7F0 614 aaPredicted RBP18.75■□□□□ 0.59
CAPN3-209ENST00000466222 KIAA1958Q8N8K9 716 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 CFAP61Q8NHU2 1237 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 NXPE3Q969Y0 559 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 TBL1YQ9BQ87 522 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 TRMT61BQ9BVS5 477 aaKnown RBP18.75■□□□□ 0.59
CAPN3-209ENST00000466222 CIPCQ9C0C6 399 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 MANSC1Q9H8J5 431 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 LRRC40Q9H9A6 602 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 SYBUQ9NX95 663 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 EPS15L1Q9UBC2 864 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 PCDHGC4Q9Y5F7 938 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 MAD1L1Q9Y6D9 718 aa18.75■□□□□ 0.59
CAPN3-209ENST00000466222 ARNTLO00327 626 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 BNIP3LO60238 219 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ECI2O75521 394 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms