RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CTCFP49711 727 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 PGGT1BP53609 377 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 CLDN2P57739 230 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 RPL7AP62424 266 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 ADORA2A-AS1P86434 159 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 ROR2Q01974 943 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 RNPS1Q15287 305 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 TSTQ16762 297 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 ZNF324BQ6AW86 544 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 TMTC3Q6ZXV5 915 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 SLC46A3Q7Z3Q1 461 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 CUZD1Q86UP6 607 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 LURAP1LQ8IV03 231 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 SFTPA2Q8IWL1 248 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 B4GALNT2Q8NHY0 566 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 ETNPPLQ8TBG4 499 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 MSTO1Q9BUK6 570 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 HEMGNQ9BXL5 484 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 USP44Q9H0E7 712 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 RBM38Q9H0Z9 239 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 RANBP17Q9H2T7 1088 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 PRKRIP1Q9H875 184 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 OLA1Q9NTK5 396 aaKnown RBP4.45□□□□□ -1.7
LRCH3-211ENST00000466054 SCINQ9Y6U3 715 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 TTC3P53804 2025 aa4.45□□□□□ -1.7
LRCH3-211ENST00000466054 A0A0U1RQF3 1178 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 NPIPB15A6NHN6 443 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 LRRC53A6NM62 1247 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 HSPB2A8KAH6 182 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 VWA5AO00534 786 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 GRID2O43424 1007 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 SPRY3O43610 288 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 LDB2O43679 373 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 MTA2O94776 668 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 DDX58O95786 925 aaKnown RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 MT-CYBP00156 380 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 TFP02787 698 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 CLEC3BP05452 202 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 BSGP35613 385 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 RXRGP48443 463 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 HARS2P49590 506 aaKnown RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 CLCN5P51795 746 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 EFNA5P52803 228 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 CAPSQ13938 189 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 MAPRE1Q15691 268 aaKnown RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 HSPB2Q16082 182 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 DNTTIP2Q5QJE6 756 aaKnown RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 CDC73Q6P1J9 531 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 PDXDC1Q6P996 788 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 Q6ZTK2 550 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 MON1BQ7L1V2 547 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 ZNF367Q7RTV3 350 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 CTU1Q7Z7A3 348 aaKnown RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 GJC3Q8NFK1 279 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 CADM4Q8NFZ8 388 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 NEK9Q8TD19 979 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 ZC3HAV1LQ96H79 300 aaKnown RBP4.44□□□□□ -1.7
LRCH3-211ENST00000466054 SIN3AQ96ST3 1273 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 MXRA8Q9BRK3 442 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 SMYD2Q9NRG4 433 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 SMC4Q9NTJ3 1288 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 AASSQ9UDR5 926 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 FAM96BQ9Y3D0 163 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 A3GALT2U3KPV4 340 aa4.44□□□□□ -1.7
LRCH3-211ENST00000466054 USP17L23D6RBM5 183 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 I6L893 689 aaPredicted RBP4.43□□□□□ -1.7
LRCH3-211ENST00000466054 TNFRSF13BO14836 293 aaPredicted RBP4.43□□□□□ -1.7
LRCH3-211ENST00000466054 ATP2C2O75185 946 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 BAIAP3O94812 1187 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 SOX30O94993 753 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 CCNDBP1O95273 360 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 LCATP04180 440 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 TFPIP10646 304 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 CHATP28329 748 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 CXCR3P49682 368 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 HDAC4P56524 1084 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 GEMIN4P57678 1058 aaKnown RBP4.43□□□□□ -1.7
LRCH3-211ENST00000466054 NFATC4Q14934 902 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 PPP2R5BQ15173 497 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 CCNG2Q16589 344 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 TCTN1Q2MV58 587 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 ZNF284Q2VY69 593 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 FSCBQ5H9T9 825 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 PRAMEF19Q5SWL8 479 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 CES5AQ6NT32 575 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 FAM180BQ6P0A1 224 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 C1orf122Q6ZSJ8 110 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 Q6ZSV7 163 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 UCMAQ8WVF2 138 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 FBXL8Q96CD0 374 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 APOLD1Q96LR9 279 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 BBS4Q96RK4 519 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 SF3B5Q9BWJ5 86 aaKnown RBP4.43□□□□□ -1.7
LRCH3-211ENST00000466054 PLEKHA4Q9H4M7 779 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 HIF1ANQ9NWT6 349 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 PLK2Q9NYY3 685 aa4.43□□□□□ -1.7
LRCH3-211ENST00000466054 ORC3Q9UBD5 711 aaPredicted RBP4.43□□□□□ -1.7
LRCH3-211ENST00000466054 UTYO14607 1347 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms