RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DEF6Q9H4E7 631 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 RCOR3Q9P2K3 495 aaPredicted RBP21.94■■□□□ 1.1
LIME1-203ENST00000465591 ANKRD11Q6UB99 2663 aaPredicted RBP21.94■■□□□ 1.1
LIME1-203ENST00000465591 LRP4O75096 1905 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 TMEM110-MUSTN1A8MSY1 372 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 TAF4O00268 1085 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 AKR1B10O60218 316 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 TMEM253P0C7T8 217 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 MYF5P13349 255 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 CKMT2P17540 419 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 LIG3P49916 1009 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 MAXP61244 160 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 TBX2Q13207 712 aaPredicted RBP21.93■■□□□ 1.1
LIME1-203ENST00000465591 CAMK2BQ13554 666 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 ZNF235Q14590 738 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 CFAP58Q5T655 872 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 NCBP2-AS2Q69YL0 99 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 NYAP1Q6ZVC0 841 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 RBFAQ8N0V3 343 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 ATPAF2Q8N5M1 289 aa21.93■■□□□ 1.1
LIME1-203ENST00000465591 ZNF548Q8NEK5 533 aaPredicted RBP21.93■■□□□ 1.1
LIME1-203ENST00000465591 NHEJ1Q9H9Q4 299 aaPredicted RBP21.93■■□□□ 1.1
LIME1-203ENST00000465591 ZNHIT6Q9NWK9 470 aaKnown RBP21.93■■□□□ 1.1
LIME1-203ENST00000465591 LY6G6EA0A0G2JKS1 128 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 MAP3K6O95382 1288 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 SERPINB6P35237 376 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 RENBPP51606 427 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 AP1S1P61966 158 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 HNRNPKP61978 463 aaKnown RBP eCLIP21.92■■□□□ 1.1
LIME1-203ENST00000465591 ERAP2Q6P179 960 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 GALNT15Q8N3T1 639 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 MGME1Q9BQP7 344 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 NOD2Q9HC29 1040 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 PCDHGC4Q9Y5F7 938 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 U3KQA8 63 aa21.92■■□□□ 1.1
LIME1-203ENST00000465591 K7ESM1 405 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 SCAMP1O15126 338 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 C1SP09871 688 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 JUNDP17535 347 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 GM2AP17900 193 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 ACP1P24666 158 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 MESDQ14696 234 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 LRRC14Q15048 493 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 PAFAH1B3Q15102 231 aaKnown RBP21.91■■□□□ 1.1
LIME1-203ENST00000465591 ANKRD20A8PQ5CZ79 823 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 PQLC3Q8N755 202 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 SLC35G2Q8TBE7 412 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 LRRN4Q8WUT4 740 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 FAF2Q96CS3 445 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 NUDCD1Q96RS6 583 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 C1QTNF7Q9BXJ2 289 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 NLGN3Q9NZ94 848 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 RP1P56715 2156 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 CFAP47Q6ZTR5 3102 aa21.91■■□□□ 1.1
LIME1-203ENST00000465591 SRRM3A6NNA2 597 aaPredicted RBP21.9■■□□□ 1.1
LIME1-203ENST00000465591 A8MX80 341 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 HTRA2O43464 458 aaPredicted RBP21.9■■□□□ 1.1
LIME1-203ENST00000465591 TPM1P09493 284 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 MAN1A1P33908 653 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 THOP1P52888 689 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 YPEL5P62699 121 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 GALNT2Q10471 571 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 TRAF2Q12933 501 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 AGERQ15109 404 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 TSR1Q2NL82 804 aaKnown RBP21.9■■□□□ 1.1
LIME1-203ENST00000465591 LIPIQ6XZB0 460 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 DPPA4Q7L190 304 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 KCTD6Q8NC69 237 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 MDM1Q8TC05 714 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 RAPGEF5Q92565 580 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 APOLD1Q96LR9 279 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 CCDC42Q96M95 316 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 ZNF670Q9BS34 389 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 CHD6Q8TD26 2715 aa21.9■■□□□ 1.1
LIME1-203ENST00000465591 TRABD2BA6NFA1 517 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 LZTS3O60299 673 aaPredicted RBP21.89■■□□□ 1.09
LIME1-203ENST00000465591 GCATO75600 419 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 HSPA9P38646 679 aaKnown RBP21.89■■□□□ 1.09
LIME1-203ENST00000465591 GARSP41250 739 aaKnown RBP21.89■■□□□ 1.09
LIME1-203ENST00000465591 MMP13P45452 471 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 IHHQ14623 411 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 PDK2Q15119 407 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 PTPRRQ15256 657 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 HES3Q5TGS1 186 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 MARC1Q5VT66 337 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 KCTD16Q68DU8 428 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 SARM1Q6SZW1 724 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 MACC1Q6ZN28 852 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 TMPRSS12Q86WS5 348 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 PHACTR4Q8IZ21 702 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 TEX26Q8N6G2 289 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 PLA2G15Q8NCC3 412 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 LMX1AQ8TE12 382 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 NT5MQ9NPB1 228 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 SCUBE2Q9NQ36 999 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 B4GALT6Q9UBX8 382 aa21.89■■□□□ 1.09
LIME1-203ENST00000465591 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.88■■□□□ 1.09
LIME1-203ENST00000465591 AKR1B15C9JRZ8 316 aaPredicted RBP21.88■■□□□ 1.09
LIME1-203ENST00000465591 H3BM21 787 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 AQP9O43315 295 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms