RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 SPATA17Q96L03 361 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 MRGPRX2Q96LB1 330 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 UBXN10Q96LJ8 280 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 LRGUKQ96M69 825 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 GPR78Q96P69 363 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 GBP5Q96PP8 586 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 ADAM2Q99965 735 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 SLC25A23Q9BV35 468 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 CAB39LQ9H9S4 337 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 SYTL2Q9HCH5 934 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 C8orf4Q9NR00 106 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 TLR8Q9NR97 1041 aaKnown RBP8.57□□□□□ -1.04
ACTB-208ENST00000464611 RGS18Q9NS28 235 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 TRMT13Q9NUP7 481 aaKnown RBP8.57□□□□□ -1.04
ACTB-208ENST00000464611 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 PLK2Q9NYY3 685 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 DLGAP2Q9P1A6 1054 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 NEU3Q9UQ49 428 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 ASB3Q9Y575 518 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 TIMM13Q9Y5L4 95 aaPredicted RBP8.57□□□□□ -1.04
ACTB-208ENST00000464611 NR2E3Q9Y5X4 410 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 SLC4A7Q9Y6M7 1214 aa8.57□□□□□ -1.04
ACTB-208ENST00000464611 ALPK3Q96L96 1907 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 LOC100653049A0A140TA62 436 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 SMIM31A0A1B0GVY4 71 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 LOC285095A0A1B0GVY8 99 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TYW5A2RUC4 315 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 DPPA5A6NC42 116 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 MROH6A6NGR9 719 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 GOLGA8CPA6NN73 597 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 E9PBE3 544 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 F5H423 210 aaPredicted RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 H7C4K7 107 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TRIM38O00635 465 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 ZBTB14O43829 449 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 KLHL41O60662 606 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 BCAS2O75934 225 aaPredicted RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 KRT34O76011 436 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TOP3BO95985 862 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 LYNP07948 512 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 PDHA1P08559 390 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 OGNP20774 298 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 GABRB3P28472 473 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 THPOP40225 353 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 NUDT2P50583 147 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 EPHB1P54762 984 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 USP46P62068 366 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 IRF9Q00978 393 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 DSC1Q08554 894 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 CCNIQ14094 377 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 LPIN1Q14693 890 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 POU6F1Q14863 301 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 LRRC26Q2I0M4 334 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 PIGGQ5H8A4 983 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 COQ5Q5HYK3 327 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 OGFRL1Q5TC84 451 aaPredicted RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 ZNF470Q6ECI4 717 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 OR52E8Q6IFG1 317 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 ESRP1Q6NXG1 681 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 CD300LGQ6UXG3 332 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 SCD5Q86SK9 330 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 DSELQ8IZU8 1212 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 PQLC1Q8N2U9 271 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 KDM1BQ8NB78 822 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 PCYOX1LQ8NBM8 494 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 SPATA22Q8NHS9 363 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 FBXO27Q8NI29 283 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 SPPL2BQ8TCT7 592 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 GDPD5Q8WTR4 605 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 CASP10Q92851 521 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 AZIN2Q96A70 460 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 ROPN1LQ96C74 230 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 NXNL1Q96CM4 212 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 FEM1CQ96JP0 617 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 FAM193BQ96PV7 902 aaPredicted RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 OMDQ99983 421 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 C19orf43Q9BQ61 176 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 POLR1EQ9GZS1 481 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 EPB41L1Q9H4G0 881 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 ELAC1Q9H777 363 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 MEAF6Q9HAF1 191 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 SP110Q9HB58 689 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TMEM39AQ9NV64 488 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 TMEM30AQ9NV96 361 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 INTS10Q9NVR2 710 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 PIH1D1Q9NWS0 290 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 CPSF2Q9P2I0 782 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 SLC17A6Q9P2U8 582 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 XPR1Q9UBH6 696 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 SUCOQ9UBS9 1254 aaKnown RBP8.56□□□□□ -1.04
ACTB-208ENST00000464611 SARDHQ9UL12 918 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 HS3ST4Q9Y661 456 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 COMMD10Q9Y6G5 202 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 PATJQ8NI35 1801 aa8.56□□□□□ -1.04
ACTB-208ENST00000464611 LTBP2Q14767 1821 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms