RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 NEK9Q8TD19 979 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 FAM149B1Q96BN6 582 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 INTS12Q96CB8 462 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 LYZL4Q96KX0 146 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 GFM1Q96RP9 751 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 ITPAQ9BY32 194 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 MUC13Q9H3R2 512 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 EHD2Q9NZN4 543 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 IL36RNQ9UBH0 155 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 CARD8Q9Y2G2 431 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 LYVE1Q9Y5Y7 322 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 KCNE2Q9Y6J6 123 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 CACNA1IQ9P0X4 2223 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 PRSS47A8MTI9 375 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 DOK2O60496 412 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 SEC31AO94979 1220 aaKnown RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 CLDN7O95471 211 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 MT-CYBP00156 380 aaPredicted RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 TFP02787 698 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 EIF2S1P05198 315 aaKnown RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 HOXD3P31249 432 aaPredicted RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 MLH1P40692 756 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 EFNA5P52803 228 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 GOLGA8DPQ0D2H9 430 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 DPCR1Q3MIW9 517 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 FAM205BPQ63HN1 556 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 ZDHHC17Q8IUH5 632 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 SAMD14Q8IZD0 417 aaPredicted RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 RBFAQ8N0V3 343 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 TEX45Q8NA69 505 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 CREB3L4Q8TEY5 395 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 ASB5Q8WWX0 329 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 OTULINQ96BN8 352 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 URB1-AS1Q96HZ7 61 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 YME1L1Q96TA2 773 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 TMEM204Q9BSN7 226 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 POLDIP3Q9BY77 421 aaKnown RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 CDT1Q9H211 546 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 MVB12BQ9H7P6 319 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 SEPT11Q9NVA2 429 aaKnown RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 HCFC1R1Q9NWW0 138 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 CTNNAL1Q9UBT7 734 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 HAO1Q9UJM8 370 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 INTS6Q9UL03 887 aaKnown RBP4.29□□□□□ -1.72
CLK1-208ENST00000464454 FAM96BQ9Y3D0 163 aa4.29□□□□□ -1.72
CLK1-208ENST00000464454 UTYO14607 1347 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 FAM237BA0A1B0GVD1 139 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 K7ENM7 598 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 GTPBP1O00178 669 aaKnown RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 AP3D1O14617 1153 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 LIASO43766 372 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 MTA2O94776 668 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 GFPT2O94808 682 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 ALPLP05186 524 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 HOXC6P09630 235 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 GNLYP22749 145 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 MAPK4P31152 587 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 HTR6P50406 440 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 CLDN2P57739 230 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 DSC1Q08554 894 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 DCAF6Q58WW2 860 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 FSCBQ5H9T9 825 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 FNBP1LQ5T0N5 605 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 CES5AQ6NT32 575 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 CCDC129Q6ZRS4 1044 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 IKBIPQ70UQ0 350 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 BRINP3Q76B58 766 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 FBXL14Q8N1E6 418 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 ARHGEF2Q92974 986 aaKnown RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 GTF3C6Q969F1 213 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 PERPQ96FX8 193 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 ZC3HAV1LQ96H79 300 aaKnown RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 BBS4Q96RK4 519 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 SIN3AQ96ST3 1273 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 NTPCRQ9BSD7 190 aaKnown RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 STRA6Q9BX79 667 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 LHPPQ9H008 270 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 GHITMQ9H3K2 345 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 PLEKHA4Q9H4M7 779 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 HAUS2Q9NVX0 235 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 NDRG3Q9UGV2 375 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 SLCO3A1Q9UIG8 710 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 MYO6Q9UM54 1294 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 PCDHA7Q9UN72 937 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 RAI2Q9Y5P3 530 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 INSL5Q9Y5Q6 135 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 CAPN7Q9Y6W3 813 aa4.28□□□□□ -1.72
CLK1-208ENST00000464454 RSF1Q96T23 1441 aaPredicted RBP4.28□□□□□ -1.72
CLK1-208ENST00000464454 KAT6BQ8WYB5 2073 aa4.27□□□□□ -1.73
CLK1-208ENST00000464454 A0A1W2PRG0 241 aa4.27□□□□□ -1.73
CLK1-208ENST00000464454 A6NCN8 305 aa4.27□□□□□ -1.73
CLK1-208ENST00000464454 LIPT2A6NK58 231 aa4.27□□□□□ -1.73
CLK1-208ENST00000464454 BECN2A8MW95 431 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms