RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	TMEM63A	O94886	807 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	ETFA	P13804	333 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	PIGA	P37287	484 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	ARL1	P40616	181 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	RFX2	P48378	723 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	RXRG	P48443	463 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	EIF3B	P55884	814 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	RPS3A	P61247	264 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	DCAF7	P61962	342 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	CEBPZ	Q03701	1054 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	LMOD3	Q0VAK6	560 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	CTTN	Q14247	550 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	COL28A1	Q2UY09	1125 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	FNBP1L	Q5T0N5	605 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	OTUD1	Q5VV17	481 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	NCAPH2	Q6IBW4	605 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	CDC73	Q6P1J9	531 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	ZNF549	Q6P9A3	640 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	TMTC3	Q6ZXV5	915 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	MON1B	Q7L1V2	547 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	SLC35F3	Q8IY50	421 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	PELI3	Q8N2H9	469 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	ZCCHC9	Q8N567	271 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	NEXN-AS1	Q8NBZ9	246 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	ETNPPL	Q8TBG4	499 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	OIT3	Q8WWZ8	545 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	H2AFJ	Q9BTM1	129 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	EBF3	Q9H4W6	596 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	CYSLTR2	Q9NS75	346 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	KRT84	Q9NSB2	600 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	SLC6A13	Q9NSD5	602 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	TMEM51	Q9NW97	253 aa		4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	CISD1	Q9NZ45	108 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313	LSM4	Q9Y4Z0	139 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-210	ENST00000464313		A0A087X0M5	115 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313		A0A1B0GX30	115 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PGPEP1L	A6NFU8	196 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	CD8B2	A6NJW9	211 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	LRRC53	A6NM62	1247 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313		J3KR12	359 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	TIMM23	O14925	209 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SPRY3	O43610	288 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	ITM2A	O43736	263 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	BAIAP3	O94812	1187 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	MT-CYB	P00156	380 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SCP2	P22307	547 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	MAPK4	P31152	587 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SHMT1	P34896	483 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	RARS	P54136	660 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	LINC00205	P59089	165 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	RPL7A	P62424	266 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	ERV3-1	Q14264	604 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	FRG1	Q14331	258 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	FGFBP1	Q14512	234 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	RALBP1	Q15311	655 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	TWIST1	Q15672	202 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	GSTA3	Q16772	222 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SGO1	Q5FBB7	561 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SNX30	Q5VWJ9	437 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	DAB2IP	Q5VWQ8	1189 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	QSOX2	Q6ZRP7	698 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PXK	Q7Z7A4	578 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PATL1	Q86TB9	770 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SFTPA2	Q8IWL1	248 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	CCDC105	Q8IYK2	499 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	TMEM163	Q8TC26	289 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SNAPC3	Q92966	411 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	GTF3C6	Q969F1	213 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	INTS12	Q96CB8	462 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	WDFY2	Q96P53	400 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PLEKHA4	Q9H4M7	779 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	MAGEE1	Q9HCI5	957 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	SMYD2	Q9NRG4	433 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PLK2	Q9NYY3	685 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	FZD10	Q9ULW2	581 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PSAT1	Q9Y617	370 aa		4.21	□□□□□ -1.74
PTPN12-210	ENST00000464313	PRR23D1	E9PI22	279 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	SEC14L5	O43304	696 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	SEC14L2	O76054	403 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	IRF1	P10914	325 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	KRT10	P13645	584 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	IL7R	P16871	459 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	NAGA	P17050	411 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	AGA	P20933	346 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	ARRB2	P32121	409 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	CCKAR	P32238	428 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	BSG	P35613	385 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	OLR1	P78380	273 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	ABAT	P80404	500 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	ROR2	Q01974	943 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	ITGAD	Q13349	1161 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	MED22	Q15528	200 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	TCTN1	Q2MV58	587 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	MMEL1	Q495T6	779 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	FSCB	Q5H9T9	825 aa		4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	CPLX2	Q6PUV4	134 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-210	ENST00000464313	CYP20A1	Q6UW02	462 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms