RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 EME2A4GXA9 379 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 DFFAO00273 331 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 PEX11BO96011 259 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 CYP1A2P05177 515 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 HSPA9P38646 679 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 ARL4AP40617 200 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 LIG3P49916 1009 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 BLKP51451 505 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 POLR2LP62875 67 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 BCL2L1Q07817 233 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 COL28A1Q2UY09 1125 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 CFAP58Q5T655 872 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 RBFAQ8N0V3 343 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 SDR16C5Q8N3Y7 309 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 SNIP1Q8TAD8 396 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 FAM71BQ8TC56 605 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 LMX1AQ8TE12 382 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 IL12RB2Q99665 862 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 LRRC61Q9BV99 259 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 TCEAL2Q9H3H9 227 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 NENFQ9UMX5 172 aa20.69■□□□□ 0.9
PDLIM4-205ENST00000463615 LRRK1Q38SD2 2015 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 A0A087X0T9 212 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 MUSKO15146 869 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 GCATO75600 419 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 FAM228BP0C875 321 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 RARAP10276 462 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 TCF4P15884 667 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 CR2P20023 1033 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 SLC25A11Q02978 314 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 PPARDQ03181 441 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 RALGDSQ12967 914 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 MTM1Q13496 603 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 LBRQ14739 615 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 PRRT3Q5FWE3 981 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 LVRNQ6Q4G3 990 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 C19orf48Q6RUI8 117 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 TP53INP2Q8IXH6 220 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 FSTL5Q8N475 847 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 IFI44Q8TCB0 444 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 CSPG4P5Q96PW8 444 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 SLC13A1Q9BZW2 595 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 THAP2Q9H0W7 228 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 RCOR3Q9P2K3 495 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 IP6K2Q9UHH9 426 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 COQ6Q9Y2Z9 468 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 AK5Q9Y6K8 562 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 ASXL3Q9C0F0 2248 aa20.68■□□□□ 0.9
PDLIM4-205ENST00000463615 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 A0A1W2PQ67 120 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 HTRA2O43464 458 aaPredicted RBP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 HNRNPH3P31942 346 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 EIF2S3P41091 472 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 HK3P52790 923 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 SLC10A7Q0GE19 358 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 NFATC4Q14934 902 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 DEFB133Q30KQ1 61 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 RALGPS1Q5JS13 557 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 C6orf132Q5T0Z8 1188 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 TMCO3Q6UWJ1 677 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 DPPA4Q7L190 304 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 PDZD3Q86UT5 571 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 TPCN2Q8NHX9 752 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 GRAMD1AQ96CP6 724 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 NSMCE3Q96MG7 304 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 DEPDC7Q96QD5 511 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 APOOQ9BUR5 198 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 CLPBQ9H078 707 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 ETNK2Q9NVF9 386 aa20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 LUC7L2Q9Y383 392 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-205ENST00000463615 TLX3O43711 291 aaPredicted RBP20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 MAFKO60675 156 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 SOCS5O75159 536 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 DXOO77932 396 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 GYPCP04921 128 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 HOXC4P09017 264 aaPredicted RBP20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 MYF5P13349 255 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 TSHRP16473 764 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 PTMSP20962 102 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 AMPD1P23109 780 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 HTR1BP28222 390 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 SERPINB6P35237 376 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 RPIAP49247 311 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 ADKP55263 362 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 INPP5AQ14642 412 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 NR0B2Q15466 257 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 SMTNL2Q2TAL5 461 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 FAXCQ5TGI0 409 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 TXNRD3NBQ6F5E7 133 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 ALKBH5Q6P6C2 394 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 LIPIQ6XZB0 460 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 LRRC49Q8IUZ0 686 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 ATL2Q8NHH9 583 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 HNRNPLLQ8WVV9 542 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 GLMNQ92990 594 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 NAT6Q93015 286 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 PCDH18Q9HCL0 1135 aa20.66■□□□□ 0.9
PDLIM4-205ENST00000463615 DGKBQ9Y6T7 804 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms