RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 LRRC39Q96DD0 335 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 SMIM14Q96QK8 99 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 MCCC1Q96RQ3 725 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-202ENST00000463060 LYSMD1Q96S90 227 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 ADGRE3Q9BY15 652 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 MKRN2Q9H000 416 aaKnown RBP14.44□□□□□ -0.1
COL6A1-202ENST00000463060 PLAC1Q9HBJ0 212 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 POLR3BQ9NW08 1133 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-202ENST00000463060 PIH1D1Q9NWS0 290 aaKnown RBP14.44□□□□□ -0.1
COL6A1-202ENST00000463060 MTRF1LQ9UGC7 380 aaKnown RBP14.44□□□□□ -0.1
COL6A1-202ENST00000463060 PHTF1Q9UMS5 762 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 A0A0J9YYE9 177 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 CCDC151A5D8V7 595 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 SDR42E2A6NKP2 422 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 BANF1O75531 89 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 TRBC1P01850 177 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 H2AFXP16104 143 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 PSMA3P25788 255 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 ITGB7P26010 798 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 MGAT1P26572 445 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 RPS9P46781 194 aaKnown RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 GRIA4P48058 902 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 RPS14P62263 151 aaKnown RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 DHX9Q08211 1270 aaKnown RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 GALNT3Q14435 633 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 UBXN2BQ14CS0 331 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 FASTKD3Q14CZ7 662 aaKnown RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 BRD3Q15059 726 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 PTPRRQ15256 657 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 CRY1Q16526 586 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 CDKN3Q16667 212 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 SYT13Q7L8C5 426 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 DSG4Q86SJ6 1040 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 CBARPQ8N350 705 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 SLC25A41Q8N5S1 370 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 DNAAF3Q8N9W5 541 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 HNRNPLLQ8WVV9 542 aaKnown RBP14.43□□□□□ -0.1
COL6A1-202ENST00000463060 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 SCRN2Q96FV2 425 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 RANBP9Q96S59 729 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 IL22Q9GZX6 179 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 C2orf42Q9NWW7 574 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 SPO11Q9Y5K1 396 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 NCOR1O75376 2440 aa14.43□□□□□ -0.1
COL6A1-202ENST00000463060 UQCRHLA0A096LP55 91 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 MROH6A6NGR9 719 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 C16orf96A6NNT2 1141 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 SYNCRIPO60506 623 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 CPP00450 1065 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 UQCRHP07919 91 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 DRD3P35462 400 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 SESN2P58004 480 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 POLR2LP62875 67 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 PDIA2Q13087 525 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 MTM1Q13496 603 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 STARD3Q14849 445 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 CST6Q15828 149 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 UGP2Q16851 508 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 BBS9Q3SYG4 887 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 CENPUQ71F23 418 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 PARS2Q7L3T8 475 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 TMC3Q7Z5M5 1100 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 MMAAQ8IVH4 418 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 TTC30BQ8N4P2 665 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 LPCAT1Q8NF37 534 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 PDCD6IPQ8WUM4 868 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 RMDN1Q96DB5 314 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 UHRF1Q96T88 793 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 EBNA1BP2Q99848 306 aaKnown RBP14.42□□□□□ -0.1
COL6A1-202ENST00000463060 KIFC1Q9BW19 673 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 HDAC8Q9BY41 377 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 CHRDQ9H2X0 955 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 MAGEE1Q9HCI5 957 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 SAYSD1Q9NPB0 183 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 SYBUQ9NX95 663 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 BFARQ9NZS9 450 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 DLGAP2Q9P1A6 1054 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 BDP1A6H8Y1 2624 aa14.42□□□□□ -0.1
COL6A1-202ENST00000463060 MAGEB16A2A368 324 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 KPNA3O00505 521 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-202ENST00000463060 AREL1O15033 823 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 SPINT1O43278 529 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 DCXO43602 365 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 LDB2O43679 373 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 ADH1BP00325 375 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 IL1BP01584 269 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 PRKCGP05129 697 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 ADRA1DP25100 572 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 HNF1BP35680 557 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 ELK3P41970 407 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 MAGEA4P43358 317 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 CRADDP78560 199 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 DNAJC21Q5F1R6 531 aaKnown RBP14.41□□□□□ -0.1
COL6A1-202ENST00000463060 PCID2Q5JVF3 399 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 FAM46CQ5VWP2 391 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 ZNF776Q68DI1 518 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-202ENST00000463060 CWF19L1Q69YN2 538 aaKnown RBP14.41□□□□□ -0.1
COL6A1-202ENST00000463060 MAMSTRQ6ZN01 415 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 TRIM67Q6ZTA4 783 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms