RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 OR1E3Q8WZA6 343 aa15.83■□□□□ 0.12
SND1-203ENST00000463020 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.12
SND1-203ENST00000463020 MRPL40Q9NQ50 206 aaKnown RBP15.83■□□□□ 0.12
SND1-203ENST00000463020 LHX3Q9UBR4 397 aa15.83■□□□□ 0.12
SND1-203ENST00000463020 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
SND1-203ENST00000463020 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
SND1-203ENST00000463020 RNF215Q9Y6U7 377 aa15.83■□□□□ 0.12
SND1-203ENST00000463020 ANKRD36A6QL64 1941 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 BUB1O43683 1085 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 KDELR3O43731 214 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 PCCBP05166 539 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 TPM3P06753 285 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 MAPKAPK2P49137 400 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 ARSDP51689 593 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 SNX16P57768 344 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 SNRPD1P62314 119 aaKnown RBP15.82■□□□□ 0.12
SND1-203ENST00000463020 RAPGEF1Q13905 1077 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 NFATC4Q14934 902 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 LRRC14Q15048 493 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 POLD3Q15054 466 aaPredicted RBP15.82■□□□□ 0.12
SND1-203ENST00000463020 ELOCQ15369 112 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 TMEM52BQ4KMG9 183 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 HSP90AA4PQ58FG1 418 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 DTX1Q86Y01 620 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 CCNJLQ8IV13 435 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 SLITRK4Q8IW52 837 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 PELI3Q8N2H9 469 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 CCL4L1Q8NHW4 92 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 RXFP2Q8WXD0 754 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 USP7Q93009 1102 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 APOOQ9BUR5 198 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 NAA15Q9BXJ9 866 aaKnown RBP15.82■□□□□ 0.12
SND1-203ENST00000463020 OSBPL1AQ9BXW6 950 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 TTYH3Q9C0H2 523 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 FGF22Q9HCT0 170 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 PCDH12Q9NPG4 1184 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 DOLKQ9UPQ8 538 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 DOPEY2Q9Y3R5 2298 aa15.82■□□□□ 0.12
SND1-203ENST00000463020 TMEM202A6NGA9 273 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 GOLGA6L6A8MZA4 724 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 NVLO15381 856 aaKnown RBP15.81■□□□□ 0.12
SND1-203ENST00000463020 BUB1BO60566 1050 aaPredicted RBP15.81■□□□□ 0.12
SND1-203ENST00000463020 RAMP2O60895 175 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 ITGB2P05107 769 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 JMJD7P0C870 316 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 HDAC4P56524 1084 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 NRG1Q02297 640 aaPredicted RBP15.81■□□□□ 0.12
SND1-203ENST00000463020 EIF3IQ13347 325 aaKnown RBP15.81■□□□□ 0.12
SND1-203ENST00000463020 C16orf72Q14CZ0 275 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 CYTH1Q15438 398 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 STX1AQ16623 288 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 SPRED1Q7Z699 444 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 HMCESQ96FZ2 354 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 GDAP1L1Q96MZ0 367 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 RBM15Q96T37 977 aaKnown RBP eCLIP15.81■□□□□ 0.129e-7■■□□□ 14.3
SND1-203ENST00000463020 STRADBQ9C0K7 418 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 MAGEH1Q9H213 219 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 KLQ9UEF7 1012 aa15.81■□□□□ 0.12
SND1-203ENST00000463020 CXorf51AA0A1B0GTR3 108 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 RASGRP1O95267 797 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 PLEKP08567 350 aaPredicted RBP15.8■□□□□ 0.12
SND1-203ENST00000463020 ALPIP09923 528 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 CCL4P13236 92 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 CTSEP14091 401 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 CHRNB2P17787 502 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 GM2AP17900 193 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
SND1-203ENST00000463020 RGRP47804 291 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 LIG3P49916 1009 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 PEX5P50542 639 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 MAPK10P53779 464 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 RHOAP61586 193 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 ANO6Q4KMQ2 910 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 CERCAMQ5T4B2 595 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 ACBD5Q5T8D3 534 aaPredicted RBP15.8■□□□□ 0.12
SND1-203ENST00000463020 LVRNQ6Q4G3 990 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 ATG14Q6ZNE5 492 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 EPS8L1Q8TE68 723 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 TBC1D31Q96DN5 1066 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 ARHGEF26Q96DR7 871 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 NSMCE3Q96MG7 304 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 ARHGAP9Q9BRR9 750 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 DKK3Q9UBP4 350 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 NOCTQ9UK39 431 aaKnown RBP15.8■□□□□ 0.12
SND1-203ENST00000463020 MFHAS1Q9Y4C4 1052 aa15.8■□□□□ 0.12
SND1-203ENST00000463020 SDK2Q58EX2 2172 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 TSPAN11A1L157 253 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 C2CD4BA6NLJ0 364 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 B4DGG1 531 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
SND1-203ENST00000463020 MMP12P39900 470 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 TLE1Q04724 770 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 HLTFQ14527 1009 aaKnown RBP eCLIP15.79■□□□□ 0.12
SND1-203ENST00000463020 MANEAQ5SRI9 462 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 KLHDC7AQ5VTJ3 777 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 OGFOD3Q6PK18 319 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 ZNF574Q6ZN55 896 aaPredicted RBP15.79■□□□□ 0.12
SND1-203ENST00000463020 GKN2Q86XP6 184 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 LURAP1LQ8IV03 231 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms