RNA–Protein interactions for RNA: ENST00000462998.1

PTPN23-203, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 3

Gene PTPN23, Length 260 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-203ENST00000462998 TIGD7Q6NT04 549 aaPredicted RBP11.09□□□□□ -0.63
PTPN23-203ENST00000462998 KANSL1Q7Z3B3 1105 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 PARGQ86W56 976 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 GAS2L3Q86XJ1 694 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 PQLC3Q8N755 202 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 TP53I13Q8NBR0 393 aaPredicted RBP11.09□□□□□ -0.63
PTPN23-203ENST00000462998 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.09□□□□□ -0.63
PTPN23-203ENST00000462998 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 ECHDC3Q96DC8 303 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 MRFAP1L1Q96HT8 127 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 NSMCE3Q96MG7 304 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
PTPN23-203ENST00000462998 NOD2Q9HC29 1040 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 MBNL1Q9NR56 388 aaKnown RBP11.09□□□□□ -0.63
PTPN23-203ENST00000462998 GPR27Q9NS67 375 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 UCKL1Q9NWZ5 548 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 HYOU1Q9Y4L1 999 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 TTLL3Q9Y4R7 772 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 COL5A1P20908 1838 aaPredicted RBP11.09□□□□□ -0.63
PTPN23-203ENST00000462998 WDFY3Q8IZQ1 3526 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 IGF2RP11717 2491 aa11.09□□□□□ -0.63
PTPN23-203ENST00000462998 SPTY2D1-AS1A0A0U1RR47 76 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 A8MX80 341 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 H3BM21 787 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 TRAFD1O14545 582 aaPredicted RBP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 MATN3O15232 486 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 SOCS5O75159 536 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 CPP00450 1065 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 PCCBP05166 539 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 ELFN1P0C7U0 828 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 CR2P20023 1033 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 MX2P20592 715 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 SLC1A1P43005 524 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 THOP1P52888 689 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 GBE1Q04446 702 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 DNAJC3Q13217 504 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 SPA17Q15506 151 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 IFI16Q16666 785 aaKnown RBP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 WSCD2Q2TBF2 565 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 HS1BP3Q53T59 392 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 TPRG1LQ5T0D9 272 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 UNQ6494/PRO21346Q6UXR6 183 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 DPPA4Q7L190 304 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 RHOT1Q8IXI2 618 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 CCDC170Q8IYT3 715 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 SLC25A45Q8N413 288 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 CCNYQ8ND76 341 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 LRRN4Q8WUT4 740 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 IFT43Q96FT9 208 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 RNF157Q96PX1 679 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 PANX2Q96RD6 677 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 MAK16Q9BXY0 300 aaKnown RBP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 DTLQ9NZJ0 730 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 MSRB2Q9Y3D2 182 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.64
PTPN23-203ENST00000462998 FREM2Q5SZK8 3169 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 LRRK1Q38SD2 2015 aa11.08□□□□□ -0.64
PTPN23-203ENST00000462998 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 TRIM38O00635 465 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 APOL1O14791 398 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 HTRA2O43464 458 aaPredicted RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 SIGLEC6O43699 453 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 RFPL3O75679 317 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 DKK1O94907 266 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 CSF2P04141 144 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 ALPPL2P10696 532 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 NME1P15531 152 aaKnown RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 JUNDP17535 347 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 COMTP21964 271 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 CCNCP24863 283 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 YPEL5P62699 121 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 SLC10A2Q12908 348 aaPredicted RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 TRAF2Q12933 501 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 RALGDSQ12967 914 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 PTK2BQ14289 1009 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 TCEAL1Q15170 157 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 RALGPS1Q5JS13 557 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 LRRC38Q5VT99 294 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 DHRS13Q6UX07 377 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 RFX6Q8HWS3 928 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 TEX26Q8N6G2 289 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 ZNF548Q8NEK5 533 aaPredicted RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 OR4C6Q8NH72 309 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 MAML1Q92585 1016 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 TSGA13Q96PP4 275 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 SEMA3CQ99985 751 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 POLR1EQ9GZS1 481 aaKnown RBP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 HAUS2Q9NVX0 235 aa11.07□□□□□ -0.64
PTPN23-203ENST00000462998 RBM22Q9NW64 420 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN23-203ENST00000462998 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms