RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
RAE1-207ENST00000462438 CPEB1Q9BZB8 566 aaKnown RBP12.2□□□□□ -0.46
RAE1-207ENST00000462438 GRHL1Q9NZI5 618 aa12.2□□□□□ -0.46
RAE1-207ENST00000462438 ATXN10Q9UBB4 475 aa12.2□□□□□ -0.46
RAE1-207ENST00000462438 ERVW-1Q9UQF0 538 aa12.2□□□□□ -0.46
RAE1-207ENST00000462438 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
RAE1-207ENST00000462438 TLDC2A0PJX2 215 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 APODP05090 189 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 IL9P15248 144 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 CTHP32929 405 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 CD68P34810 354 aaPredicted RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 GALK1P51570 392 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 CCR3P51677 355 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 GEMP55040 296 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 PRPSAP1Q14558 356 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 TMEM196Q5HYL7 178 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 SYNPOQ8N3V7 929 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 MLXIPLQ9NP71 852 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 THAP10Q9P2Z0 257 aaPredicted RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 SORCS3Q9UPU3 1222 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 SPECC1L-ADORA2AF8WAN1 911 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 HLA-DQB2P05538 268 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 RPL26P61254 145 aaKnown RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 SPDYCQ5MJ68 293 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 ALS2CLQ60I27 953 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 NAT8LQ8N9F0 302 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 ARRDC2Q8TBH0 407 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 CINPQ9BW66 212 aaPredicted RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 RBM22Q9NW64 420 aaKnown RBP eCLIP12.19□□□□□ -0.469e-6■□□□□ 9.6
RAE1-207ENST00000462438 ELOVL2Q9NXB9 296 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 WNT16Q9UBV4 365 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 RPL26L1Q9UNX3 145 aaKnown RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 CCDC160A6NGH7 325 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 CCT8L1PA6NM43 557 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 TP73O15350 636 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 SOCS5O75159 536 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 TMCC1O94876 653 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 SRCP12931 536 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 MYO19Q96H55 970 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 HIC2Q96JB3 615 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 ZFYVE19Q96K21 471 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 P2RY13Q9BPV8 354 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 LRRC40Q9H9A6 602 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 KLHL8Q9P2G9 620 aaPredicted RBP12.19□□□□□ -0.46
RAE1-207ENST00000462438 LIMD1Q9UGP4 676 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 SPO11Q9Y5K1 396 aa12.19□□□□□ -0.46
RAE1-207ENST00000462438 REV3LO60673 3130 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 AP2A1O95782 977 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 MAGEA3P43357 314 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 SLC10A7Q0GE19 358 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 DYNC1I2Q13409 638 aaKnown RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 ZNF235Q14590 738 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 PTPRNQ16849 979 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 GEN1Q17RS7 908 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 TMEM215Q68D42 235 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 DUS1LQ6P1R4 473 aaKnown RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 TRMT11Q7Z4G4 463 aaKnown RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 LINC00523Q86TU6 105 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 CCDC197Q8NCU1 140 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 MGARPQ8TDB4 240 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 FRS2Q8WU20 508 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 ZNF419Q96HQ0 510 aaPredicted RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 IER2Q9BTL4 223 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 FBXO9Q9UK97 447 aaPredicted RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 SLC8A2Q9UPR5 921 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 KAT7O95251 611 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 JCHAINP01591 159 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 TSHRP16473 764 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 CA4P22748 312 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 RPL21P46778 160 aaKnown RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 MRPS21P82921 87 aaKnown RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 FOXD4Q12950 439 aaPredicted RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 SLC44A4Q53GD3 710 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 C22orf39Q6P5X5 142 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 KDELC1Q6UW63 502 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 SLC15A3Q8IY34 581 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 GLIS1Q8NBF1 620 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 CPT1BQ92523 772 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 ATP6V1G3Q96LB4 118 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 FAM118BQ9BPY3 351 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 OSBPL6Q9BZF3 934 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 TMEM245Q9H330 911 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 XAB2Q9HCS7 855 aaKnown RBP12.18□□□□□ -0.46
RAE1-207ENST00000462438 ASIC3Q9UHC3 531 aa12.18□□□□□ -0.46
RAE1-207ENST00000462438 CBX4O00257 560 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ZBTB24O43167 697 aaPredicted RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 ZNF821O75541 412 aaPredicted RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 NQO1P15559 274 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 ADRA1AP35348 466 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 GPS1Q13098 491 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 TMEM53Q6P2H8 277 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms