RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 SYBUQ9NX95 663 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 MTRF1LQ9UGC7 380 aaKnown RBP13.57□□□□□ -0.24
PBRM1-219ENST00000462207 SPO11Q9Y5K1 396 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 SMAPO00193 183 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 NDC80O14777 642 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ALOX15BO15296 676 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 FGF1P05230 155 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 DCNP07585 359 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 TNNT3P45378 269 aaPredicted RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 EPHB1P54762 984 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 SARNPP82979 210 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 SATB1Q01826 763 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 GRM3Q14832 879 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 POU6F1Q14863 301 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ZNF805Q5CZA5 627 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 CWF19L1Q69YN2 538 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ANKMY2Q8IV38 441 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 IGDCC3Q8IVU1 814 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 OR2T3Q8NH03 318 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 OSBPL1AQ9BXW6 950 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 FAM129AQ9BZQ8 928 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ARNT2Q9HBZ2 717 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 SAYSD1Q9NPB0 183 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 CCDC78A2IDD5 438 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 MID1O15344 667 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 DCXO43602 365 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 PPFIA2O75334 1257 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 EPOP01588 193 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 MLNP12872 115 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 RPS14P62263 151 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 MSLNQ13421 630 aaPredicted RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 SEPT6Q14141 434 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 CST6Q15828 149 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 CRY1Q16526 586 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 HSF5Q4G112 596 aaPredicted RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 PDIK1LQ8N165 341 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 EIF1ADQ8N9N8 165 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 AENQ8WTP8 325 aaKnown RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 EDAQ92838 391 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 LRIG1Q96JA1 1093 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ADGRE3Q9BY15 652 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 CHMP2BQ9UQN3 213 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ITM2BQ9Y287 266 aa13.56□□□□□ -0.24
PBRM1-219ENST00000462207 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
PBRM1-219ENST00000462207 TRIOO75962 3097 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 TCRBV21S2A2A0A5A6 115 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 C16orf96A6NNT2 1141 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 A8MX80 341 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 ANKRD66B4E2M5 251 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 E7ESA3 106 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 SLC4A1P02730 911 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 TIMP2P16035 220 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 ITGB7P26010 798 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 ELK3P41970 407 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 ABL2P42684 1182 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 GRIA4P48058 902 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 ZNF776Q68DI1 518 aaPredicted RBP13.55□□□□□ -0.24
PBRM1-219ENST00000462207 CENPUQ71F23 418 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 DSG4Q86SJ6 1040 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 ZBED8Q8IZ13 594 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 SYNPOQ8N3V7 929 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 AADATQ8N5Z0 425 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 SIGLEC10Q96LC7 697 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 C9orf72Q96LT7 481 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 NELL2Q99435 816 aa13.55□□□□□ -0.24
PBRM1-219ENST00000462207 NPIPB15A6NHN6 443 aaPredicted RBP13.54□□□□□ -0.24
PBRM1-219ENST00000462207 CHURC1-FNTBB4DL54 471 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 C1QTNF3-AMACRE9PGA6 284 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 AURKAO14965 403 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 SPINT1O43278 529 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 BUD23O43709 281 aaKnown RBP13.54□□□□□ -0.24
PBRM1-219ENST00000462207 NDUFV2P19404 249 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 MCM3P25205 808 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 UGP2Q16851 508 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 DNAJC21Q5F1R6 531 aaKnown RBP13.54□□□□□ -0.24
PBRM1-219ENST00000462207 CASC4Q6P4E1 433 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 BRAT1Q6PJG6 821 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 CES3Q6UWW8 571 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
PBRM1-219ENST00000462207 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 TSPAN33Q86UF1 283 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 TMPRSS6Q8IU80 811 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 CLDN23Q96B33 292 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 FRMD8Q9BZ67 464 aaPredicted RBP13.54□□□□□ -0.24
PBRM1-219ENST00000462207 MFSD1Q9H3U5 465 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 BFARQ9NZS9 450 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 GGT7Q9UJ14 662 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 SIT1Q9Y3P8 196 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 KCTD3Q9Y597 815 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
PBRM1-219ENST00000462207 VCANP13611 3396 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms