RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 ACVRL1P37023 503 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 CXCR3P49682 368 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 LIMK2P53671 638 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 GNA12Q03113 381 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 SEPT6Q14141 434 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 NR1D2Q14995 579 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 EFHC1Q5JVL4 640 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 ANKS6Q68DC2 871 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 ZNF783Q6ZMS7 281 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 FAM183BPQ6ZVS7 135 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 TIPARPQ7Z3E1 657 aaKnown RBP15.31■□□□□ 0.04
YIPF3-206ENST00000460903 WDTC1Q8N5D0 677 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 OR2AP1Q8NGE2 309 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 ZNF606Q8WXB4 792 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 STARD8Q92502 1023 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 OSBPL1AQ9BXW6 950 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
YIPF3-206ENST00000460903 PRDM8Q9NQV8 689 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 SLC39A1Q9NY26 324 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 KCNMB2Q9Y691 235 aa15.31■□□□□ 0.04
YIPF3-206ENST00000460903 DAB1O75553 588 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 TIMP2P16035 220 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 MPSTP25325 297 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 ELAVL4P26378 380 aaKnown RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 CSF2RBP32927 897 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 PMS1P54277 932 aaKnown RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 GCNT1Q02742 428 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 BRMS1LQ5PSV4 323 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 ATXN7L2Q5T6C5 722 aaPredicted RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 TCTN3Q6NUS6 607 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 OLFML1Q6UWY5 402 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 GDPD4Q6W3E5 623 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 MAMDC2Q7Z304 686 aaPredicted RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 CSMD2Q7Z408 3487 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 HEATR4Q86WZ0 1026 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 C17orf82Q86X59 251 aaPredicted RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 NLGN4XQ8N0W4 816 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 BMPERQ8N8U9 685 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 AGBL5Q8NDL9 886 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 NLGN4YQ8NFZ3 816 aaPredicted RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 ARHGEF2Q92974 986 aaKnown RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 NPY6RQ99463 290 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 ASPSCR1Q9BZE9 553 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 ZNF768Q9H5H4 540 aaKnown RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 WDCPQ9H6R7 721 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 TMEM9Q9P0T7 183 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 ARMCX3Q9UH62 379 aaPredicted RBP15.3■□□□□ 0.04
YIPF3-206ENST00000460903 PDZD2O15018 2839 aa15.3■□□□□ 0.04
YIPF3-206ENST00000460903 SETD2Q9BYW2 2564 aaPredicted RBP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 PMM2O15305 246 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 POP4O95707 220 aaKnown RBP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 GSRP00390 522 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 PDGFAP04085 211 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 PCCBP05166 539 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 THRAP10827 490 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 TRA2AQ13595 282 aaKnown RBP eCLIP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 CLPPQ16740 277 aaPredicted RBP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 MYLK3Q32MK0 819 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 TMEM52BQ4KMG9 183 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 DCAF12Q5T6F0 453 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 NKAIN2Q5VXU1 208 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 C16orf46Q6P387 395 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 ASB18Q6ZVZ8 466 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 DRC7Q8IY82 874 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 CCDC13Q8IYE1 715 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 PLA2G15Q8NCC3 412 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 CCDC112Q8NEF3 446 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 KIAA1143Q96AT1 154 aaPredicted RBP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 RTP4Q96DX8 246 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 HAPLN3Q96S86 360 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 SPATS2LQ9NUQ6 558 aaKnown RBP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 NDFIP2Q9NV92 336 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 MRPS18BQ9Y676 258 aaKnown RBP15.29■□□□□ 0.04
YIPF3-206ENST00000460903 CROCCQ5TZA2 2017 aa15.29■□□□□ 0.04
YIPF3-206ENST00000460903 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 B4E171 279 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 THAP12O43422 761 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 MED7O43513 233 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 SRGAP2O75044 1071 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 KRT5P13647 590 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 TCN2P20062 427 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 CSTF2P33240 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
YIPF3-206ENST00000460903 TSPAN7P41732 249 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 PRCPP42785 496 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 SNRPD1P62314 119 aaKnown RBP15.28■□□□□ 0.04
YIPF3-206ENST00000460903 CRTC2Q53ET0 693 aaPredicted RBP15.28■□□□□ 0.04
YIPF3-206ENST00000460903 ANKRD40Q6AI12 368 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 LRRC31Q6UY01 552 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 LEKR1Q6ZMV7 388 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 FAM129CQ86XR2 697 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 SRRM1Q8IYB3 904 aaKnown RBP15.28■□□□□ 0.04
YIPF3-206ENST00000460903 EFCAB3Q8N7B9 438 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 OR4D9Q8NGE8 314 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 OR56A4Q8NGH8 313 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 ATL2Q8NHH9 583 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 CPT1CQ8TCG5 803 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 C1orf74Q96LT6 269 aa15.28■□□□□ 0.04
YIPF3-206ENST00000460903 RCOR1Q9UKL0 485 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms