RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 HTR1BP28222 390 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 PCK1P35558 622 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 RPIAP49247 311 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 DPYSQ14117 519 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 ACAP1Q15027 740 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 WSCD2Q2TBF2 565 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 EFL1Q7Z2Z2 1120 aaKnown RBP22.95■■□□□ 1.26
PTPN4-207ENST00000460162 SRLQ86TD4 932 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 ZSWIM9Q86XI8 627 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 CAMK1DQ8IU85 385 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 FSTL5Q8N475 847 aaPredicted RBP22.95■■□□□ 1.26
PTPN4-207ENST00000460162 LZTR1Q8N653 840 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 NAT6Q93015 286 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 ECHDC3Q96DC8 303 aa22.95■■□□□ 1.26
PTPN4-207ENST00000460162 NAP1L5Q96NT1 182 aaPredicted RBP22.95■■□□□ 1.26
PTPN4-207ENST00000460162 ASXL3Q9C0F0 2248 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 CPED1A4D0V7 1026 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 CFAP69A5D8W1 941 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 DFFAO00273 331 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 SERPINC1P01008 464 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 LIG3P49916 1009 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 NSUN2Q08J23 767 aaKnown RBP eCLIP22.94■■□□□ 1.26
PTPN4-207ENST00000460162 NFATC4Q14934 902 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 IQCB1Q15051 598 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 DPYSL2Q16555 572 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 SOWAHCQ53LP3 525 aaPredicted RBP22.94■■□□□ 1.26
PTPN4-207ENST00000460162 FAXCQ5TGI0 409 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 LSMEM2Q8N112 164 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 TPCN2Q8NHX9 752 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 CRELD1Q96HD1 420 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 FUCA2Q9BTY2 467 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 ISCUQ9H1K1 167 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 CWC15Q9P013 229 aaKnown RBP22.94■■□□□ 1.26
PTPN4-207ENST00000460162 PTPRQQ9UMZ3 2332 aa22.94■■□□□ 1.26
PTPN4-207ENST00000460162 H3BRJ5 948 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 USP12O75317 370 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 DXOO77932 396 aaKnown RBP22.93■■□□□ 1.26
PTPN4-207ENST00000460162 TSHRP16473 764 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 TGM2P21980 687 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ITPKBP27987 946 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 HK3P52790 923 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ADKP55263 362 aaKnown RBP22.93■■□□□ 1.26
PTPN4-207ENST00000460162 AP1S1P61966 158 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 GABREP78334 506 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 BCL2L1Q07817 233 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 MTM1Q13496 603 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 C1orf61Q13536 156 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ELOCQ15369 112 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ISXQ2M1V0 245 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 TMCO4Q5TGY1 634 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 SLC35F3Q8IY50 421 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ATL2Q8NHH9 583 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 GRAMD1AQ96CP6 724 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ZNF578Q96N58 590 aaPredicted RBP22.93■■□□□ 1.26
PTPN4-207ENST00000460162 ZNF599Q96NL3 588 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 PSKH2Q96QS6 385 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 CLPBQ9H078 707 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 MYO1AQ9UBC5 1043 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 SEPT3Q9UH03 358 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 BAHCC1Q9P281 2608 aa22.93■■□□□ 1.26
PTPN4-207ENST00000460162 RP1P56715 2156 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 TCEA3O75764 348 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 RASGRP1O95267 797 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 ALPIP09923 528 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 ARL4AP40617 200 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 RENBPP51606 427 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 RALGDSQ12967 914 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 COL9A2Q14055 689 aaPredicted RBP22.92■■□□□ 1.26
PTPN4-207ENST00000460162 NR1I3Q14994 352 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 ALG11Q2TAA5 492 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 TDRD12Q587J7 1177 aaKnown RBP22.92■■□□□ 1.26
PTPN4-207ENST00000460162 ARHGAP36Q6ZRI8 547 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 SDR16C5Q8N3Y7 309 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 WDR48Q8TAF3 677 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 POLR1BQ9H9Y6 1135 aa22.92■■□□□ 1.26
PTPN4-207ENST00000460162 SMG1Q96Q15 3661 aaKnown RBP22.92■■□□□ 1.26
PTPN4-207ENST00000460162 A0A1W2PQJ5 194 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 MUSKO15146 869 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 YY2O15391 372 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 MPOP05164 745 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 SKILP12757 684 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 LSSP48449 732 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 PCBP4P57723 403 aaKnown RBP22.91■■□□□ 1.26
PTPN4-207ENST00000460162 POLR2LP62875 67 aaKnown RBP22.91■■□□□ 1.26
PTPN4-207ENST00000460162 TPM4P67936 248 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 INPP5AQ14642 412 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 ESRP1Q6NXG1 681 aaKnown RBP22.91■■□□□ 1.26
PTPN4-207ENST00000460162 LVRNQ6Q4G3 990 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 RBM44Q6ZP01 1051 aaKnown RBP22.91■■□□□ 1.26
PTPN4-207ENST00000460162 HID1Q8IV36 788 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 PAF1Q8N7H5 531 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 ARL10Q8N8L6 244 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 SPOCK2Q92563 424 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 APOOQ9BUR5 198 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 DOLKQ9UPQ8 538 aa22.91■■□□□ 1.26
PTPN4-207ENST00000460162 BZW2Q9Y6E2 419 aaKnown RBP22.91■■□□□ 1.26
PTPN4-207ENST00000460162 TRAFD1O14545 582 aaPredicted RBP22.9■■□□□ 1.26
PTPN4-207ENST00000460162 PRKCGP05129 697 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 PCCBP05166 539 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 ELFN1P0C7U0 828 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms