RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GRIN3AQ8TCU5 1115 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 RHBDD1Q8TEB9 315 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 HAUS1Q96CS2 278 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 HDAC11Q96DB2 347 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 HMCESQ96FZ2 354 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 MYOCQ99972 504 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 C2orf49Q9BVC5 232 aaPredicted RBP15.78■□□□□ 0.12
SDF4-204ENST00000459994 L2HGDHQ9H9P8 463 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 ATP13A1Q9HD20 1204 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 NEUROG3Q9Y4Z2 214 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 PCDHGB2Q9Y5G2 931 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 WASF2Q9Y6W5 498 aa15.78■□□□□ 0.12
SDF4-204ENST00000459994 A0A1B0GTQ1 180 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 C1QTNF3-AMACRE9PGA6 284 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 CCDC188H7C350 402 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 KPNA3O00505 521 aaPredicted RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 PPP1R12AO14974 1030 aaPredicted RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 FLRT2O43155 660 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 KDELR3O43731 214 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 LIASO43766 372 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 GKP32189 559 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 GARSP41250 739 aaKnown RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 SERPINH1P50454 418 aaKnown RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 CCT8P50990 548 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 C21orf59P57076 290 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 EIF3EP60228 445 aaKnown RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 GLRX5Q86SX6 157 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 MNS1Q8NEH6 495 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 C1orf54Q8WWF1 131 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 ADAMTS14Q8WXS8 1223 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 FATE1Q969F0 183 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 AP1M1Q9BXS5 423 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 FZD3Q9NPG1 666 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 IPO11Q9UI26 975 aaKnown RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 ZMIZ1Q9ULJ6 1067 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 ZFR2Q9UPR6 939 aaKnown RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 DRG1Q9Y295 367 aaKnown RBP15.77■□□□□ 0.12
SDF4-204ENST00000459994 MSRB2Q9Y3D2 182 aa15.77■□□□□ 0.12
SDF4-204ENST00000459994 IGF2RP11717 2491 aa15.77■□□□□ 0.11
SDF4-204ENST00000459994 DFFAO00273 331 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 MAFKO60675 156 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 RNGTTO60942 597 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 LEFTY1O75610 366 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 RBP3P10745 1247 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 CCNCP24863 283 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 PPIDQ08752 370 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 SFSWAPQ12872 951 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 BNIP3Q12983 259 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 HNRNPDQ14103 355 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 PRKD1Q15139 912 aaPredicted RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 OASLQ15646 514 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 SLC45A4Q5BKX6 768 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 FAM46CQ5VWP2 391 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 NAPEPLDQ6IQ20 393 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 DSG4Q86SJ6 1040 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 TRIM69Q86WT6 500 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 CDKL3Q8IVW4 592 aaPredicted RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 ATPAF2Q8N5M1 289 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 SPATA4Q8NEY3 305 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 OR6K2Q8NGY2 324 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 TFB1MQ8WVM0 346 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 ATG4AQ8WYN0 398 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 QKIQ96PU8 341 aaKnown RBP eCLIP15.76■□□□□ 0.11
SDF4-204ENST00000459994 ELF4Q99607 663 aaPredicted RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 TM6SF2Q9BZW4 377 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 IL36AQ9UHA7 158 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 RALYQ9UKM9 306 aaKnown RBP15.76■□□□□ 0.11
SDF4-204ENST00000459994 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 HPCAL4Q9UM19 191 aa15.76■□□□□ 0.11
SDF4-204ENST00000459994 SHROOM3Q8TF72 1996 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 FAM221BA6H8Z2 402 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 ZSCAN5CA6NGD5 496 aaPredicted RBP15.75■□□□□ 0.11
SDF4-204ENST00000459994 H7C0C1 242 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 SLC7A4O43246 635 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 MTSS1O43312 755 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 PCDHGA12O60330 932 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 PRAMEF11O60813 436 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 PHF2O75151 1096 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 DKK1O94907 266 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 MAP3K6O95382 1288 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 ATP5OP48047 213 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 FNTAP49354 379 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 CLDN6P56747 220 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 NXPH1P58417 271 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 IL10RBQ08334 325 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 SEL1L3Q68CR1 1132 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 TIGD7Q6NT04 549 aaPredicted RBP15.75■□□□□ 0.11
SDF4-204ENST00000459994 KDM7AQ6ZMT4 941 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 ZC3H18Q86VM9 953 aaKnown RBP15.75■□□□□ 0.11
SDF4-204ENST00000459994 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 CEP112Q8N8E3 955 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 CCNYQ8ND76 341 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 TMIEQ8NEW7 156 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 MAGOHBQ96A72 148 aaKnown RBP15.75■□□□□ 0.11
SDF4-204ENST00000459994 ZNF599Q96NL3 588 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 LGMNQ99538 433 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 FAM118BQ9BPY3 351 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 KDM4CQ9H3R0 1056 aa15.75■□□□□ 0.11
SDF4-204ENST00000459994 CFAP47Q6ZTR5 3102 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 A0A1W2PQU0 124 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms