RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MSLNQ13421 630 aaPredicted RBP19.75■□□□□ 0.75
SNX27-204ENST00000458013 CNPY4Q8N129 248 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 CLIP4Q8N3C7 705 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 UXTQ9UBK9 157 aaPredicted RBP19.75■□□□□ 0.75
SNX27-204ENST00000458013 SIGLEC16A6NMB1 481 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.75■□□□□ 0.75
SNX27-204ENST00000458013 TFECO14948 347 aaPredicted RBP19.75■□□□□ 0.75
SNX27-204ENST00000458013 CYP1A2P05177 515 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 NOS2P35228 1153 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 RCVRNP35243 200 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 OMPP47874 163 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 CERCAMQ5T4B2 595 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 CXorf57Q6NSI4 855 aaKnown RBP19.75■□□□□ 0.75
SNX27-204ENST00000458013 PACS1Q6VY07 963 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 MOB2Q70IA6 237 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 FAM129CQ86XR2 697 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 SF3B1O75533 1304 aaKnown RBP eCLIP19.75■□□□□ 0.752e-6■■■■■ 69.7
SNX27-204ENST00000458013 XYLBO75191 536 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 CEBPGP53567 150 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 PRKAA2P54646 552 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 TNK2Q07912 1038 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 FAAH2Q6GMR7 532 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 RRN3Q9NYV6 651 aa19.75■□□□□ 0.75
SNX27-204ENST00000458013 FAM92AA1XBS5 289 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 TRIM3O75382 744 aaPredicted RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 CCSAPQ6IQ19 270 aaPredicted RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 MZT2BQ6NZ67 158 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 AFTPHQ6ULP2 937 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 LDB1Q86U70 411 aaPredicted RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 PANX1Q96RD7 426 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 HMG20AQ9NP66 347 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 SNX15Q9NRS6 342 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 PLK2Q9NYY3 685 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 AREL1O15033 823 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 CHRNGP07510 517 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 CDK7P50613 346 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 BST1Q10588 318 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 BROXQ5VW32 411 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 KRT74Q7RTS7 529 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 DAW1Q8N136 415 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 TRIM63Q969Q1 353 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 FCRL4Q96PJ5 515 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 TRNT1Q96Q11 434 aaKnown RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 MCMBPQ9BTE3 642 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 POLR2LP62875 67 aaKnown RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 LGALS3BPQ08380 585 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 PTCHD4Q6ZW05 846 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 RERGQ96A58 199 aaPredicted RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 YDJCA8MPS7 323 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 NEDD8-MDP1E9PL57 170 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 MDM4O15151 490 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 NR4A1P22736 598 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 EIF4BP23588 611 aaKnown RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 RXRGP48443 463 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 CELF3Q5SZQ8 465 aaKnown RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 RNF208Q9H0X6 261 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 SAMHD1Q9Y3Z3 626 aaKnown RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
SNX27-204ENST00000458013 HDCP19113 662 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 ECM1Q16610 540 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 RGS21Q2M5E4 152 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 GPRIN3Q6ZVF9 776 aa19.74■□□□□ 0.75
SNX27-204ENST00000458013 G3V2T6 193 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 TMCC2O75069 709 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 WASP42768 502 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 OR5B17Q8NGF7 314 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 OR52E6Q96RD3 313 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 GOLGA2P5Q9HBQ8 144 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 SAR1AQ9NR31 198 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 TMEM216Q9P0N5 145 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 XPR1Q9UBH6 696 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 RBM7Q9Y580 266 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 ATP5BP06576 529 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 IL18R1Q13478 541 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 TARBP2Q15633 366 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 TCEAL5Q5H9L2 206 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 ABRAXAS1Q6UWZ7 409 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 OTOP3Q7RTS5 596 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 SPPL2CQ8IUH8 684 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 MAB21L3Q8N8X9 362 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 PIWIL2Q8TC59 973 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 HPS1Q92902 700 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 RASSF1Q9NS23 344 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 MT-ND1P03886 318 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 MPSTP25325 297 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 UGT2B15P54855 530 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 IRGCQ6NXR0 463 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 FNIP1Q8TF40 1166 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 ATL1Q8WXF7 558 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 ZYG11BQ9C0D3 744 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 PORCNQ9H237 461 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 PHF11Q9UIL8 331 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 OR4Q2P0C623 313 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 FUT4P22083 530 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 CTNNB1P35222 781 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 SNRPD1P62314 119 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 FAM182AQ5T1J6 154 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 PEG10Q86TG7 708 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 C12orf56Q8IXR9 622 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 ADGRG2Q8IZP9 1017 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms