RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 NSMCE3Q96MG7 304 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 SCNM1Q9BWG6 230 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 MAK16Q9BXY0 300 aaKnown RBP17.48■□□□□ 0.39
USP39-208ENST00000455732 LACRTQ9GZZ8 138 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 PCDH12Q9NPG4 1184 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 HAUS2Q9NVX0 235 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 ATP8A1Q9Y2Q0 1164 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 HS3ST3A1Q9Y663 406 aa17.48■□□□□ 0.39
USP39-208ENST00000455732 IGF2RP11717 2491 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 GOLGA4Q13439 2230 aaKnown RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 A0A1W2PQ67 120 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 IGLON5A6NGN9 336 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 RIOK3O14730 519 aaKnown RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 YKT6O15498 198 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 HYAL3O43820 417 aaPredicted RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 TRIM16O95361 564 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 MAP3K6O95382 1288 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 FTH1P19P0C7X4 201 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 MMP12P39900 470 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 GRK6P43250 576 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 RXRGP48443 463 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 PPIDQ08752 370 aaKnown RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 SGCGQ13326 291 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 ERAP2Q6P179 960 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 KYAT3Q6YP21 454 aaKnown RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 RAB44Q7Z6P3 723 aaPredicted RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 SLCO6A1Q86UG4 719 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 CCDC13Q8IYE1 715 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 CXorf40AQ8TE69 158 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 SAP25Q8TEE9 199 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 RNF25Q96BH1 459 aaPredicted RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 OLFM3Q96PB7 478 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 KLF6Q99612 283 aaPredicted RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 CDC6Q99741 560 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 POLR1EQ9GZS1 481 aaKnown RBP17.47■□□□□ 0.39
USP39-208ENST00000455732 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 FZD3Q9NPG1 666 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 SCUBE2Q9NQ36 999 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 GPR27Q9NS67 375 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 TOR4AQ9NXH8 423 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.47■□□□□ 0.39
USP39-208ENST00000455732 DUSP10Q9Y6W6 482 aa17.47■□□□□ 0.39
USP39-208ENST00000455732 KNTC1P50748 2209 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 CFAP69A5D8W1 941 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 A6NNZ2 444 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 RAD51BO15315 384 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 PAK4O96013 591 aaPredicted RBP17.46■□□□□ 0.39
USP39-208ENST00000455732 TNNT1P13805 278 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 CES1P23141 567 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 EPHA8P29322 1005 aaPredicted RBP17.46■□□□□ 0.39
USP39-208ENST00000455732 CTNNA1P35221 906 aaKnown RBP17.46■□□□□ 0.39
USP39-208ENST00000455732 MAXP61244 160 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 POLR2LP62875 67 aaKnown RBP17.46■□□□□ 0.39
USP39-208ENST00000455732 TFDP2Q14188 446 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 SPOCD1Q6ZMY3 1216 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 KIAA1328Q86T90 577 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 GATAD2AQ86YP4 633 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 RFX6Q8HWS3 928 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 EXD1Q8NHP7 514 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 ADAMTS14Q8WXS8 1223 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 KLHDC7BQ96G42 594 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 MYOCQ99972 504 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 TMEM121BQ9BXQ6 578 aaPredicted RBP17.46■□□□□ 0.39
USP39-208ENST00000455732 BRD8Q9H0E9 1235 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 NT5MQ9NPB1 228 aa17.46■□□□□ 0.39
USP39-208ENST00000455732 ASPMQ8IZT6 3477 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 TM7SF2O76062 418 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 DKK1O94907 266 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 ZRANB2O95218 330 aaKnown RBP eCLIP17.45■□□□□ 0.38
USP39-208ENST00000455732 THEGLP0DJG4 465 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 CCNB1P14635 433 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 ITIH2P19823 946 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 MARCKSL1P49006 195 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 NR2C2P49116 596 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 ARRB1P49407 418 aaPredicted RBP17.45■□□□□ 0.38
USP39-208ENST00000455732 IFI35P80217 286 aaPredicted RBP17.45■□□□□ 0.38
USP39-208ENST00000455732 AGERQ15109 404 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 PDK1Q15118 436 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 PPP2R5EQ16537 467 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 TFDP3Q5H9I0 405 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 UNQ6494/PRO21346Q6UXR6 183 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 KANSL1Q7Z3B3 1105 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 DCP2Q8IU60 420 aaKnown RBP17.45■□□□□ 0.38
USP39-208ENST00000455732 RCOR2Q8IZ40 523 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 CHCHD4Q8N4Q1 142 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 PNPLA1Q8N8W4 532 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 LRRC57Q8N9N7 239 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 OR13H1Q8NG92 308 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 KRT35Q92764 455 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 RBM41Q96IZ5 413 aaKnown RBP17.45■□□□□ 0.38
USP39-208ENST00000455732 BMFQ96LC9 184 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 LGMNQ99538 433 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 C1QTNF7Q9BXJ2 289 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 RBM22Q9NW64 420 aaKnown RBP eCLIP17.45■□□□□ 0.38
USP39-208ENST00000455732 NEUROG3Q9Y4Z2 214 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 HEY1Q9Y5J3 304 aa17.45■□□□□ 0.38
USP39-208ENST00000455732 hCG_1818297A0A087WSY0 165 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 TTC24A2A3L6 582 aaPredicted RBP17.44■□□□□ 0.38
USP39-208ENST00000455732 GRID2IPA4D2P6 1211 aa17.44■□□□□ 0.38
USP39-208ENST00000455732 FAM221BA6H8Z2 402 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms