RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PHF21BQ96EK2 531 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 NSMCE3Q96MG7 304 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CCDC106Q9BWC9 280 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 OSBPL1AQ9BXW6 950 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 NUF2Q9BZD4 464 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 ILKAPQ9H0C8 392 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 MAGEH1Q9H213 219 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 COMMD8Q9NX08 183 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 PRRC2BQ5JSZ5 2229 aaKnown RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 LOC285095A0A1B0GVY8 99 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 KLHL2O95198 593 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 GOT2P00505 430 aaKnown RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 C1RP00736 705 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 PDHA1P08559 390 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.51
VTA1-203ENST00000452973 EZRP15311 586 aaKnown RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 ITGB8P26012 769 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 EPHA3P29320 983 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 CRABP2P29373 138 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 SESN3P58005 492 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 TUBB3Q13509 450 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 ADGRF1Q5T601 910 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 CCDC117Q8IWD4 279 aaPredicted RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 EFHBQ8N7U6 833 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 TOP1MTQ969P6 601 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 THTPAQ9BU02 230 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 CDH19Q9H159 772 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 PLK2Q9NYY3 685 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 TAGLN3Q9UI15 199 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 UBA6A0AVT1 1052 aaPredicted RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 ABLIM3O94929 683 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 APOA4P06727 396 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 RPSAP08865 295 aaKnown RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 PMLP29590 882 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 POU4F1Q01851 419 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 PDCD2Q16342 344 aaPredicted RBP11.84□□□□□ -0.51
VTA1-203ENST00000452973 FSCBQ5H9T9 825 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 HECTD2Q5U5R9 776 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 FAM219BQ5XKK7 198 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 STYXQ8WUJ0 223 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 ANKRD49Q8WVL7 239 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 OR52B2Q96RD2 323 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 POMKQ9H5K3 350 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 SEPT3Q9UH03 358 aa11.84□□□□□ -0.51
VTA1-203ENST00000452973 CCDC162PA2VCL2 907 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 MROH6A6NGR9 719 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 H3BNC9 293 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 TBL1XO60907 577 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 CLDN11O75508 207 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 ANP32DO95626 131 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 GLP2RO95838 553 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 CDKN2DP55273 166 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 KPNB1Q14974 876 aaKnown RBP11.83□□□□□ -0.51
VTA1-203ENST00000452973 GPR158Q5T848 1215 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 PHTF2Q8N3S3 785 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 LPCAT1Q8NF37 534 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 GPR78Q96P69 363 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 YME1L1Q96TA2 773 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 MRPL46Q9H2W6 279 aaKnown RBP11.83□□□□□ -0.51
VTA1-203ENST00000452973 SCUBE2Q9NQ36 999 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 ZDHHC2Q9UIJ5 367 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 MID2Q9UJV3 735 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 VWA7Q9Y334 891 aa11.83□□□□□ -0.51
VTA1-203ENST00000452973 ZNF195O14628 629 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 GJA1P17302 382 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 TSPAN8P19075 237 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 CCND1P24385 295 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 LEPRP48357 1165 aaKnown RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 SLC25A3Q00325 362 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 TXNDC5Q8NBS9 432 aaKnown RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 OR6K2Q8NGY2 324 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 GABPB2Q8TAK5 448 aaPredicted RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 MARK4Q96L34 752 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 BPIFA1Q9NP55 256 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 SPO11Q9Y5K1 396 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 TCAF2A6NFQ2 919 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 CD3EAPO15446 510 aaKnown RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 SLC7A4O43246 635 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 S1PR4O95977 384 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 FGF1P05230 155 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 HDCP19113 662 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 TFEBP19484 476 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 HLA-DPA1P20036 260 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 MZF1P28698 734 aaPredicted RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 SERPINB5P36952 375 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 CYP4F8P98187 520 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 DSG1Q02413 1049 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms