RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 PCDHGA5Q9Y5G8 931 aa11.21□□□□□ -0.61
HDLBP-224ENST00000452065 DOCK9Q9BZ29 2069 aa11.21□□□□□ -0.62
HDLBP-224ENST00000452065 RALGAPA1Q6GYQ0 2036 aa11.21□□□□□ -0.62
HDLBP-224ENST00000452065 LOC285095A0A1B0GVY8 99 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 FAM47DPA6NHR8 397 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 ANKRD66B4E2M5 251 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 RNGTTO60942 597 aaKnown RBP11.2□□□□□ -0.62
HDLBP-224ENST00000452065 EPN2O95208 641 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 RETP07949 1114 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PDHA1P08559 390 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 NFKB1P19838 968 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 XPAP23025 273 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-224ENST00000452065 CD27P26842 260 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PTGER3P43115 390 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 GRIA4P48058 902 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 LMNB2Q03252 620 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 MPP3Q13368 585 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 SNX1Q13596 522 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PRPSAP1Q14558 356 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 TMEM259Q4ZIN3 620 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 LYSMD4Q5XG99 296 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 ERAP2Q6P179 960 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 SYT10Q6XYQ8 523 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 HORMAD1Q86X24 394 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDLBP-224ENST00000452065 DEFB119Q8N690 84 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 ATL2Q8NHH9 583 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 SPATA22Q8NHS9 363 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 C1orf216Q8TAB5 229 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 CCDC110Q8TBZ0 833 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PDCD6IPQ8WUM4 868 aaKnown RBP11.2□□□□□ -0.62
HDLBP-224ENST00000452065 HSPA12BQ96MM6 686 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 MCCC1Q96RQ3 725 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-224ENST00000452065 TRIB3Q96RU7 358 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 ORAI3Q9BRQ5 295 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 C1QTNF2Q9BXJ5 285 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PCDH12Q9NPG4 1184 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 FAM153AQ9UHL3 310 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 RSPH14Q9UHP6 348 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 FEZ2Q9UHY8 353 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PILRBQ9UKJ0 227 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 DMTF1Q9Y222 760 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PIEZO1Q92508 2521 aa11.2□□□□□ -0.62
HDLBP-224ENST00000452065 PLXNA2O75051 1894 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 A0A0J9YYE9 177 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 GOLGA6L10A0A0M3HER8 536 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 A0A1W2PPC4 97 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 A0A1W2PQU0 124 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 KIF2AO00139 706 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 NEMP1O14524 444 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 PSMD3O43242 534 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 PCDH8O95206 1070 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 MT-CYBP00156 380 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 CPP00450 1065 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 TRBC1P01850 177 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 MMP12P39900 470 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 DHPSP49366 369 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 GEMP55040 296 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 GDF10P55107 478 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 CDK18Q07002 472 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 AGERQ15109 404 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 ZNF284Q2VY69 593 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 CCDC70Q6NSX1 233 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 KDELC1Q6UW63 502 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 DPPA4Q7L190 304 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 RABEPKQ7Z6M1 372 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 SYT12Q8IV01 421 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 RAVER1Q8IY67 606 aaKnown RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 CBARPQ8N350 705 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 PAF1Q8N7H5 531 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 OXNAD1Q96HP4 312 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 LENG8Q96PV6 779 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 LYSMD1Q96S90 227 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 SRPK1Q96SB4 655 aaKnown RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 GORASP1Q9BQQ3 440 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 SLC17A9Q9BYT1 436 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 ZFR2Q9UPR6 939 aaKnown RBP11.19□□□□□ -0.62
HDLBP-224ENST00000452065 CHKBQ9Y259 395 aa11.19□□□□□ -0.62
HDLBP-224ENST00000452065 GOLGA6CA6NDK9 693 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 GOLGA6BA6NDN3 693 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 MEI4A8MW99 385 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 PRR5-ARHGAP8B1AHC4 643 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 LRP3O75074 770 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 PMPCBO75439 489 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 FSBPO95073 299 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 METTL18O95568 372 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 NDST3O95803 873 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 GOLGA6DP0CG33 693 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 ITIH2P19823 946 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 ITPKAP23677 461 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 ACTN2P35609 894 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 COILP38432 576 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-224ENST00000452065 PAFAH1B1P43034 410 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 LIG3P49916 1009 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 EPHB1P54762 984 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 WNT3AP56704 352 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 PPP2CBP62714 309 aa11.18□□□□□ -0.62
HDLBP-224ENST00000452065 PPP2CAP67775 309 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms