RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC7A4O43246 635 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 FZD6O60353 706 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 METTL18O95568 372 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 RPL22P35268 128 aaKnown RBP13.12□□□□□ -0.31
VPS33A-202ENST00000451053 PCSK7Q16549 785 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 UGP2Q16851 508 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 ARMC12Q5T9G4 340 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 KDELC2Q7Z4H8 507 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 TTC7BQ86TV6 843 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 BBOF1Q8ND07 529 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 PIH1D2Q8WWB5 315 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 SMIM14Q96QK8 99 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 TRIB3Q96RU7 358 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 GPR174Q9BXC1 333 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 FAM129AQ9BZQ8 928 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 BTBD1Q9H0C5 482 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 FAM114A2Q9NRY5 505 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 PAK5Q9P286 719 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
VPS33A-202ENST00000451053 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
VPS33A-202ENST00000451053 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
VPS33A-202ENST00000451053 PRR23AA6NEV1 266 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 FAM47DPA6NHR8 397 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 AREL1O15033 823 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 MAP3K13O43283 966 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 SEMA4FO95754 770 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 CA4P22748 312 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 XPAP23025 273 aaPredicted RBP13.11□□□□□ -0.31
VPS33A-202ENST00000451053 DRG2P55039 364 aaKnown RBP13.11□□□□□ -0.31
VPS33A-202ENST00000451053 GEMP55040 296 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 WNT3AP56704 352 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 PPP2CBP62714 309 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 PPP2CAP67775 309 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 SEMG2Q02383 582 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 RPL6Q02878 288 aaKnown RBP13.11□□□□□ -0.31
VPS33A-202ENST00000451053 CDK18Q07002 472 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 CUL1Q13616 776 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 PTPRRQ15256 657 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 TRIP13Q15645 432 aaPredicted RBP13.11□□□□□ -0.31
VPS33A-202ENST00000451053 PARP6Q2NL67 630 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 DEFB119Q8N690 84 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 LPCAT1Q8NF37 534 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 IPMKQ8NFU5 416 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 SNF8Q96H20 258 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 MRGPRX2Q96LB1 330 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
VPS33A-202ENST00000451053 PCDH12Q9NPG4 1184 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 VPS45Q9NRW7 570 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 NEU2Q9Y3R4 380 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 FADS3Q9Y5Q0 445 aa13.11□□□□□ -0.31
VPS33A-202ENST00000451053 UQCRHLA0A096LP55 91 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 AP1G1O43747 822 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 NDUFS2O75306 463 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 ANXA9O76027 345 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 UQCRHP07919 91 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 CTPS1P17812 591 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 TNFRSF8P28908 595 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 CNR2P34972 360 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 MMP12P39900 470 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 ADCY8P40145 1251 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 PTPN5P54829 565 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 FAM193AP78312 1265 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 SLC7A5Q01650 507 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 CALCOCO2Q13137 446 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 MPP3Q13368 585 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 OLIG2Q13516 323 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 GALNT3Q14435 633 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 PRPSAP1Q14558 356 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 ELF2Q15723 593 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 PLK5Q496M5 336 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 WDR93Q6P2C0 686 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 CEP68Q76N32 757 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 PCGF5Q86SE9 256 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 KLHDC8BQ8IXV7 354 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
VPS33A-202ENST00000451053 OR2T34Q8NGX1 318 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 SEC14L1Q92503 715 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 RAB7BQ96AH8 199 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 IFT43Q96FT9 208 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 FEM1CQ96JP0 617 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 FICDQ9BVA6 458 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 DUSP15Q9H1R2 295 aaPredicted RBP13.1□□□□□ -0.31
VPS33A-202ENST00000451053 KCNH6Q9H252 994 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 ANKZF1Q9H8Y5 726 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 ETNK1Q9HBU6 452 aa13.1□□□□□ -0.31
VPS33A-202ENST00000451053 EPB41L5Q9HCM4 733 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms