RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 LRG1P02750 347 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 ATXN1LP0C7T5 689 aaKnown RBP16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 HSPA1AP0DMV8 641 aaKnown RBP16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 HSPA1BP0DMV9 641 aaKnown RBP16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 DNAJB1P25685 340 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 RGRP47804 291 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 CREMQ03060 361 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 FSCBQ5H9T9 825 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 RNF219Q5W0B1 726 aaPredicted RBP16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 CXorf57Q6NSI4 855 aaKnown RBP16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 MAVSQ7Z434 540 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 TREML1Q86YW5 311 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 TMC8Q8IU68 726 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 HERC6Q8IVU3 1022 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 AGAP11Q8TF27 550 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 ELMO2Q96JJ3 720 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 EXOC2Q96KP1 924 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 NSMCE3Q96MG7 304 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 CADM1Q9BY67 442 aaKnown RBP16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 LRRC3Q9BY71 257 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 FAM96AQ9H5X1 160 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 MROH6A6NGR9 719 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CBX4O00257 560 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CCL16O15467 120 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 GYG2O15488 501 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 TBL1XO60907 577 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 H2AFYO75367 372 aaKnown RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 HSPA4LO95757 839 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 SBK3P0C264 359 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CRABP2P29373 138 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 TUBB3Q13509 450 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 ZYG11AQ6WRX3 759 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 GPR65Q8IYL9 337 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 C7orf61Q8IZ16 206 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 FSTL5Q8N475 847 aaPredicted RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CARNMT1Q8N4J0 409 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 GABPB2Q8TAK5 448 aaPredicted RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 SCYL1Q96KG9 808 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 ZNF599Q96NL3 588 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CCDC106Q9BWC9 280 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 TAS2R1Q9NYW7 299 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 APOBEC2Q9Y235 224 aaKnown RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 A0A1W2PRU2 124 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 ILVBLA1L0T0 632 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 TMEM114B3SHH9 223 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 KDELR3O43731 214 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 OLFM2O95897 454 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 ALOX15P16050 662 aaPredicted RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CTNNB1P35222 781 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 TAS2R39P59534 338 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 POU4F1Q01851 419 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 PABPC1LQ4VXU2 614 aaKnown RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CNSTQ6PJW8 725 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 RINLQ6ZS11 566 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CHST9Q7L1S5 443 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 PNPLA1Q8N8W4 532 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 IFT43Q96FT9 208 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 GATA5Q9BWX5 397 aaPredicted RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 MUC3BQ9H195 1237 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 RETREG1Q9H6L5 497 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 HCFC1R1Q9NWW0 138 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 UBA2Q9UBT2 640 aaPredicted RBP16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 MAFFQ9ULX9 164 aa16.19■□□□□ 0.18
AP000253.1-201ENST00000449339 CCL22O00626 93 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 ZNF195O14628 629 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 GSC2O15499 205 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 TLL1O43897 1013 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 SNAP91O60641 907 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 CKMP06732 381 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 ENO1P06733 434 aaKnown RBP16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 ADH1AP07327 375 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 MYL4P12829 197 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 LEPRP48357 1165 aaKnown RBP16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 IDH3AP50213 366 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 SLC12A2P55011 1212 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 RCN2Q14257 317 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 GALNT3Q14435 633 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 TBCCQ15814 346 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 ZNF789Q5FWF6 425 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 LINGO4Q6UY18 593 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 ZNF781Q8N8C0 355 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 WFDC5Q8TCV5 224 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 STYXQ8WUJ0 223 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 RAD9AQ99638 391 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 OMDQ99983 421 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 CORO1BQ9BR76 489 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 SMG9Q9H0W8 520 aaKnown RBP16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 DNAJC28Q9NX36 388 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 STOML2Q9UJZ1 356 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 SSX2IPQ9Y2D8 614 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 TBC1D30Q9Y2I9 924 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 KCTD3Q9Y597 815 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 SLC7A4O43246 635 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 LDB2O43679 373 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 KLHL2O95198 593 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 C1RP00736 705 aa16.18■□□□□ 0.18
AP000253.1-201ENST00000449339 CCND1P24385 295 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms