RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 SUSD2Q9UGT4 822 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 RSPH14Q9UHP6 348 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 CDC23Q9UJX2 597 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 PPM1HQ9ULR3 514 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 WDFY4Q6ZS81 3184 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 SPAG17Q6Q759 2223 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PATE3B3GLJ2 98 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 CCDC188H7C350 402 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 TM4SF5O14894 197 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 MUSKO15146 869 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 MID1O15344 667 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PSMD3O43242 534 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PHF2O75151 1096 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 GCATO75600 419 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 RNASEH2AO75792 299 aaKnown RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 ANXA9O76027 345 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 GAS8O95995 478 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 UGT2B4P06133 528 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 GNSP15586 552 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 GKP32189 559 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 ACSL1P33121 698 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 COILP38432 576 aaPredicted RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 CD86P42081 329 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 LMAN1P49257 510 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 FNTAP49354 379 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 SUOXP51687 545 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 EPHB1P54762 984 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 GEMP55040 296 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 FOXK1P85037 733 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 DSC2Q02487 901 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 OASLQ15646 514 aaKnown RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 WHAMMP3Q1A5X7 153 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PARP6Q2NL67 630 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 P3H1Q32P28 736 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 ZNF805Q5CZA5 627 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 ARMC12Q5T9G4 340 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 CCDC137Q6PK04 289 aaKnown RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 CACUL1Q86Y37 369 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 RGL4Q8IZJ4 473 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 ZNF567Q8N184 647 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PGBD5Q8N414 524 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 CNTD1Q8N815 330 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 CCDC110Q8TBZ0 833 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PDCD6IPQ8WUM4 868 aaKnown RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 IFT43Q96FT9 208 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 HSPA12BQ96MM6 686 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 SPATA13Q96N96 652 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 KLHL32Q96NJ5 620 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 NEUROG2Q9H2A3 272 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 RXFP3Q9NSD7 469 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 PAK5Q9P286 719 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 AAR2Q9Y312 384 aaKnown RBP9.26□□□□□ -0.93
RFX3-207ENST00000449190 RAI2Q9Y5P3 530 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 WASF2Q9Y6W5 498 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 GVINP1Q7Z2Y8 2422 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 THADAQ6YHU6 1953 aa9.26□□□□□ -0.93
RFX3-207ENST00000449190 A0A1B0GTW7 788 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 TTC24A2A3L6 582 aaPredicted RBP9.25□□□□□ -0.93
RFX3-207ENST00000449190 C16orf96A6NNT2 1141 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 MEI4A8MW99 385 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 E7EVH7 732 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 NEMP1O14524 444 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 CDX4O14627 284 aaPredicted RBP9.25□□□□□ -0.93
RFX3-207ENST00000449190 SLC7A4O43246 635 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 ZNF500O60304 480 aaPredicted RBP9.25□□□□□ -0.93
RFX3-207ENST00000449190 SOCS5O75159 536 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 PIGNO95427 931 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 SEMA4FO95754 770 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 CTSLP07711 333 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 SYPP08247 313 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 NFKB1P19838 968 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 CR2P20023 1033 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 ITGB7P26010 798 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 MAOBP27338 520 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 FDFT1P37268 417 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 RGRP47804 291 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 KCNJ1P48048 391 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 NIPAL4Q0D2K0 466 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 PPP1R7Q15435 360 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 CYP1B1Q16678 543 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 POM121L1PQ3SYA9 428 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 TCEAL6Q6IPX3 200 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 ERAP2Q6P179 960 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 BRAT1Q6PJG6 821 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 ERN2Q76MJ5 926 aaKnown RBP9.25□□□□□ -0.93
RFX3-207ENST00000449190 TTC7BQ86TV6 843 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 FAM124AQ86V42 546 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 CAMK1DQ8IU85 385 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 KLHL7Q8IXQ5 586 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 TCEAL3Q969E4 200 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 RAB7BQ96AH8 199 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 RTP4Q96DX8 246 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 IMP4Q96G21 291 aaKnown RBP9.25□□□□□ -0.93
RFX3-207ENST00000449190 FCRL5Q96RD9 977 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 RBM15Q96T37 977 aaKnown RBP eCLIP9.25□□□□□ -0.93
RFX3-207ENST00000449190 EDEM2Q9BV94 578 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 ADGRE3Q9BY15 652 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms