RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LENG8Q96PV6 779 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 MYOCQ99972 504 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 TNKS2Q9H2K2 1166 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 PCDH18Q9HCL0 1135 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ATP13A1Q9HD20 1204 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 FZD3Q9NPG1 666 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 UCKL1Q9NWZ5 548 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 FADS3Q9Y5Q0 445 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 LRRD1A4D1F6 860 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 PSTPIP1O43586 416 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 TSPAN6O43657 245 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 CREB3O43889 395 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 BRINP1O60477 761 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 GIMD1P0DJR0 217 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 ADRB3P13945 408 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 MSNP26038 577 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 RABIFP47224 123 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 PEX5P50542 639 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 CDH6P55285 790 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 GEMIN4P57678 1058 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 CLDN2P57739 230 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 NRG1Q02297 640 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 C19orf57Q0VDD7 668 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 SGCGQ13326 291 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 PPP6R3Q5H9R7 873 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 EFHC2Q5JST6 749 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 CDCP2Q5VXM1 449 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 SEL1L3Q68CR1 1132 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 KYAT3Q6YP21 454 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 GCNT7Q6ZNI0 430 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 TEKT4Q8WW24 435 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 ASB12Q8WXK4 309 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 CRELD1Q96HD1 420 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 HES6Q96HZ4 224 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 APOLD1Q96LR9 279 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 ZNF578Q96N58 590 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 DEPDC7Q96QD5 511 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 ABCG4Q9H172 646 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 NCKIPSDQ9NZQ3 722 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 ZNF212Q9UDV6 495 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 DNAI1Q9UI46 699 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 MFHAS1Q9Y4C4 1052 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 PCDHA3Q9Y5H8 950 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 CSNK1G3Q9Y6M4 447 aa13.92□□□□□ -0.18
PDLIM2-213ENST00000448520 SPTY2D1-AS1A0A0U1RR47 76 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 C3orf70A6NLC5 250 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 H3BM21 787 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 FFAR2O15552 330 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 OPA1O60313 960 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 LRIG2O94898 1065 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 CSF2P04141 144 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 KRT7P08729 469 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 CXCR5P32302 372 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 CCNHP51946 323 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 ARF5P84085 180 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 KRT81Q14533 505 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 RPS6KA1Q15418 735 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 BOLA3Q53S33 107 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 LRRC38Q5VT99 294 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 GPR155Q7Z3F1 870 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 POLNQ7Z5Q5 900 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 PTAR1Q7Z6K3 402 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 SLC39A7Q92504 469 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 GRAMD1AQ96CP6 724 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 NCAPGQ9BPX3 1015 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 HERPUD2Q9BSE4 406 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 C1QTNF2Q9BXJ5 285 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 OSBPL2Q9H1P3 480 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 GPR27Q9NS67 375 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 HECAQ9UBI9 543 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 OR12D3Q9UGF7 316 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 NEU3Q9UQ49 428 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 RAI2Q9Y5P3 530 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 BPTFQ12830 3046 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 CHD5Q8TDI0 1954 aa13.91□□□□□ -0.18
PDLIM2-213ENST00000448520 TEX51A0A1B0GUA7 166 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 POM121BA6NF01 834 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 ESPNB1AK53 854 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 K7ESM1 405 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 RNF103O00237 685 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 FPGTO14772 594 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 TPP1O14773 563 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 ATXN7O15265 892 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 POP4O95707 220 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 PYGMP11217 842 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 KDELR1P24390 212 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 LSSP48449 732 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 SNRPD1P62314 119 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 ETF1P62495 437 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 DPYSL3Q14195 570 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 FGL2Q14314 439 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 FZD2Q14332 565 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 POLD3Q15054 466 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms