RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SPANXN3Q5MJ09 141 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 HYIQ5T013 277 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 WASH2PQ6VEQ5 465 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 FCGR1BQ92637 280 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 NELL1Q92832 810 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PBDC1Q9BVG4 233 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 DENND2DQ9H6A0 471 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 C14orf105Q9NVL8 296 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 TRAF6Q9Y4K3 522 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CIAO1O76071 339 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CCNDBP1O95273 360 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CYP2A6P11509 494 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CYP11B1P15538 503 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MAPK9P45984 424 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 FMO5P49326 533 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CRY2Q49AN0 593 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 FAAH2Q6GMR7 532 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CYP2R1Q6VVX0 501 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PHC3Q8NDX5 983 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 HELQQ8TDG4 1101 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CPA5Q8WXQ8 436 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MAP4K1Q92918 833 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MRPL9Q9BYD2 267 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 TPK1Q9H3S4 243 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 C3orf14Q9HBI5 128 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CFAP97Q9P2B7 532 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHA10Q9Y5I2 948 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ASCC3Q8N3C0 2202 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PIP5K1CO60331 668 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PCDH8O95206 1070 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PBLDP30039 288 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 BUD31P41223 144 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MAPK10P53779 464 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SRSF11Q05519 484 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 COL28A1Q2UY09 1125 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TTI2Q6NXR4 508 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 IL27RAQ6UWB1 636 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TTC7BQ86TV6 843 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ARHGAP12Q8IWW6 846 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ZNF565Q8N9K5 539 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 OR7G2Q8NG99 324 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ZNF563Q8TA94 476 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PMM1Q92871 262 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 COL26A1Q96A83 441 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CBWD1Q9BRT8 395 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TAS2R3Q9NYW6 316 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHB7Q9Y5E2 793 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CABIN1Q9Y6J0 2220 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SUV39H1O43463 412 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SSX5O60225 188 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PSKH1P11801 424 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GTF2F2P13984 249 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GRIA1P42261 906 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TUFMP49411 452 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PTPN21Q16825 1174 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 FNBP1LQ5T0N5 605 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 DCST2Q5T1A1 773 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SMARCD3Q6STE5 483 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 C12orf43Q96C57 262 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 KLF6Q99612 283 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 COPS4Q9BT78 406 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 OR10A4Q9H209 315 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SEMA3GQ9NS98 782 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ERVK-11Q9UQG0 969 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PLEKHA6Q9Y2H5 1048 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MTF2Q9Y483 593 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 WASF2Q9Y6W5 498 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ARID1AO14497 2285 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 KDM5AP29375 1690 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TEX51A0A1B0GUA7 166 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TYMPP19971 482 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GRIA2P42262 883 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 RAB39AQ14964 217 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 NR1I3Q14994 352 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GLRA4Q5JXX5 417 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ANXA8L1Q5VT79 327 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SLFN11Q7Z7L1 901 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SLC30A5Q8TAD4 765 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MASTLQ96GX5 879 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PPP3R2Q96LZ3 170 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 STRBPQ96SI9 672 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ZNF341Q9BYN7 854 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MTRRQ9UBK8 725 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 BCS1LQ9Y276 419 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ABCC1P33527 1531 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ITGA10O75578 1167 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PAPSS2O95340 614 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 IFNA17P01571 189 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 HMBSP08397 361 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SAGP10523 405 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MAPK3P27361 379 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TLE2Q04725 743 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 RAPSNQ13702 412 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CSHL1Q14406 222 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MAPK14Q16539 360 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GPRC6AQ5T6X5 926 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SNX32Q86XE0 403 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms