RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SLC16A12Q6ZSM3 486 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 SLC38A6Q8IZM9 456 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 FBXL20Q96IG2 436 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 PCYT2Q99447 389 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 HAPLN2Q9GZV7 340 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 WDR55Q9H6Y2 383 aaPredicted RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 NECTIN3Q9NQS3 549 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 EDN1P05305 212 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 BMP4P12644 408 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 NKX2-5P52952 324 aaPredicted RBP19.31■□□□□ 0.68
HMGA1-205ENST00000447654 TFDP2Q14188 446 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 DUSP7Q16829 419 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 IDO2Q6ZQW0 420 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 PTAR1Q7Z6K3 402 aaPredicted RBP19.31■□□□□ 0.68
HMGA1-205ENST00000447654 ADAMTSL2Q86TH1 951 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 CANT1Q8WVQ1 401 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 CDHR1Q96JP9 859 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 CPXM1Q96SM3 734 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 ZBED2Q9BTP6 218 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 PI4K2AQ9BTU6 479 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 FUNDC2Q9BWH2 189 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 MTMR12Q9C0I1 747 aa19.31■□□□□ 0.68
HMGA1-205ENST00000447654 MAFBQ9Y5Q3 323 aaPredicted RBP19.31■□□□□ 0.68
HMGA1-205ENST00000447654 COPG1Q9Y678 874 aaKnown RBP19.31■□□□□ 0.68
HMGA1-205ENST00000447654 SYNCRIPO60506 623 aaKnown RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ATG7O95352 703 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 APOA4P06727 396 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CFHP08603 1231 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 POLR2CP19387 275 aaPredicted RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 UBA1P22314 1058 aaKnown RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 TBXAS1P24557 533 aaPredicted RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 SSTR3P32745 418 aaPredicted RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 EMC2Q15006 297 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 NPTX1Q15818 432 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 TBCELQ5QJ74 424 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 RSBN1Q5VWQ0 802 aaPredicted RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ERAP2Q6P179 960 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CCDC28AQ8IWP9 274 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 RDH11Q8TC12 318 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF516Q92618 1163 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 FAM213AQ9BRX8 229 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ELP3Q9H9T3 547 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF221Q9UK13 617 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 PRORSD1PA6NEY8 169 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 FAM25AB3EWG3 89 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 FAM25CB3EWG5 89 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 FAM25GB3EWG6 89 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 MTSS1O43312 755 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 UPK1BO75841 260 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 AMHP03971 560 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 RRM2P31350 389 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ICAM3P32942 547 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CLDN10P78369 228 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 PPP2R2BQ00005 443 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CUL2Q13617 745 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 XKR3Q5GH77 459 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ERO1BQ86YB8 467 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 ELMOD2Q8IZ81 293 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 MCPH1Q8NEM0 835 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CHST13Q8NET6 341 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 RHOXF1Q8NHV9 184 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 OSCP1Q8WVF1 389 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CACNA2D2Q9NY47 1150 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 SNTG2Q9NY99 539 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 UBA2Q9UBT2 640 aaPredicted RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 WBP11Q9Y2W2 641 aaKnown RBP19.3■□□□□ 0.68
HMGA1-205ENST00000447654 PCDHB4Q9Y5E5 795 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 CENPFP49454 3210 aa19.3■□□□□ 0.68
HMGA1-205ENST00000447654 G3V2L1 256 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 GRID2O43424 1007 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 EEF1B2P24534 225 aaKnown RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 CTF1Q16619 201 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 SPATS1Q496A3 300 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 NAPRTQ6XQN6 538 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 RAVER1Q8IY67 606 aaKnown RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 TOR1AIP2Q8NFQ8 470 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 DNERQ8NFT8 737 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 GIPC2Q8TF65 315 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 MUL1Q969V5 352 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 ZBTB45Q96K62 511 aaPredicted RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 IL22Q9GZX6 179 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF302Q9NR11 478 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 TXNDC16Q9P2K2 825 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 MAU2Q9Y6X3 613 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 CNMDO75829 334 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 GABARAPO95166 117 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 NADKO95544 446 aaPredicted RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 CTRB1P17538 263 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 PSMA2P25787 234 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 TYK2P29597 1187 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 EIF2DP41214 584 aaKnown RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 RPS9P46781 194 aaKnown RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 MAPK10P53779 464 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 LAMC2Q13753 1193 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 CTRB2Q6GPI1 263 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 C8orf82Q6P1X6 216 aaPredicted RBP19.29■□□□□ 0.68
HMGA1-205ENST00000447654 KCNT2Q6UVM3 1135 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 FKBP9P1Q75LS8 142 aa19.29■□□□□ 0.68
HMGA1-205ENST00000447654 RALGPS2Q86X27 583 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms