RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HERVK_113Q902F9 699 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 LRRC46Q96FV0 321 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 KLHL4Q9C0H6 718 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF536O15090 1300 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 NEMP2A6NFY4 417 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 C1RP00736 705 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 IFNGP01579 166 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CAP1Q01518 475 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 FBXO25Q8TCJ0 367 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ITCHQ96J02 903 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 POMKQ9H5K3 350 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 L2HGDHQ9H9P8 463 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 VAV3Q9UKW4 847 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 GOLGA4Q13439 2230 aaKnown RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PTPRJQ12913 1337 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 RHPN2P1A8MT19 583 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ATG7O95352 703 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 RARAP10276 462 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 RBL1P28749 1068 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ARL2P36404 184 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 RPL14P50914 215 aaKnown RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PDGFRLQ15198 375 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ESRP1Q6NXG1 681 aaKnown RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 GPRIN3Q6ZVF9 776 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 DHFR2Q86XF0 187 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ZDHHC13Q8IUH4 622 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CYP4X1Q8N118 509 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ALLCQ8N6M5 410 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 KCNS3Q9BQ31 491 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 LOC100653049A0A140TA62 436 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 DDX3XO00571 662 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 AP3D1O14617 1153 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 DNAJA2O60884 412 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TCN1P20061 433 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CCNCP24863 283 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 SCNN1AP37088 669 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CASRP41180 1078 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 BUD31P41223 144 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TAF10Q12962 218 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CHST9Q7L1S5 443 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 EPHX4Q8IUS5 362 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 LRRC19Q9H756 370 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 COQ6Q9Y2Z9 468 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MYH13Q9UKX3 1938 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PAGE1O75459 146 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 IDO1P14902 403 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PSMB4P28070 264 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PTPN4P29074 926 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PBX3P40426 434 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CACNG1Q06432 222 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TAPT1Q6NXT6 567 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 C19orf18Q8NEA5 215 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 FCRL2Q96LA5 508 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 KLF6Q99612 283 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 IL12RB2Q99665 862 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MUC13Q9H3R2 512 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 LZTS1Q9Y250 596 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 NFAT5O94916 1531 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CHURC1-FNTBB4DL54 471 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PRMT5O14744 637 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TRIM24O15164 1050 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 HOXC12P31275 282 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MTHFRP42898 656 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CCR4P51679 360 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 STXBP1P61764 594 aaKnown RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 SLC30A8Q8IWU4 369 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 REXO1L1PQ8IX06 675 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MCEMP1Q8IX19 187 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 HDAC7Q8WUI4 952 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 DUSP9Q99956 384 aaKnown RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MYH8P13535 1937 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MAGEA13PA6NCF6 341 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 FPGTO14772 594 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 DGKIO75912 1065 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ELNP15502 786 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TPSB2P20231 275 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CCNA2P20248 432 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ATP5A1P25705 553 aaKnown RBP8.58□□□□□ -1.04
PTPN3-204ENST00000446349 L1CAMP32004 1257 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 STAT5AP42229 794 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TAS2R50P59544 299 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 TPSAB1Q15661 275 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 XKR6Q5GH73 641 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 IKBIPQ70UQ0 350 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 RASAL3Q86YV0 1011 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 HAPLN3Q96S86 360 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 SERHL2Q9H4I8 314 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 PNPLA8Q9NP80 782 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 SERHLQ9NQF3 203 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 COPS7AQ9UBW8 275 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 GGT7Q9UJ14 662 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 SIK3Q9Y2K2 1263 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 FZD9O00144 591 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ITGB5P18084 799 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 BNIP2Q12982 314 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 SPATA19Q7Z5L4 167 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 ADGRG2Q8IZP9 1017 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms