RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 CHD7Q9P2D1 2997 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 PATJQ8NI35 1801 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 IGLV3-10A0A075B6K4 115 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZNF840PA6NDX5 716 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 WASH4PA8MWX3 477 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 IRX1P78414 480 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 RCN1Q15293 331 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 HECTD3Q5T447 861 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 STXBP5Q5T5C0 1151 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TRIM68Q6AZZ1 485 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 KIAA0930Q6ICG6 404 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 C2CD4AQ8NCU7 369 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 CFAP61Q8NHU2 1237 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 MCMBPQ9BTE3 642 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 CDH19Q9H159 772 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 BPIFA1Q9NP55 256 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 NOP53Q9NZM5 478 aaKnown RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZBTB14O43829 449 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TBC1D4O60343 1298 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 SP100P23497 879 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 RANBP1P43487 201 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 CDK18Q07002 472 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 KRT72Q14CN4 511 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 GPR158Q5T848 1215 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TMCO4Q5TGY1 634 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TMEM151AQ8N4L1 468 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TXNDC5Q8NBS9 432 aaKnown RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 ISL2Q96A47 359 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TRAFD1O14545 582 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 RHOCP08134 193 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 PDHA1P08559 390 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 ATXN1LP0C7T5 689 aaKnown RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 SLC11A2P49281 568 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 CDKN2DP55273 166 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 DEFB103AP81534 67 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 IL10RBQ08334 325 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 CUL3Q13618 768 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 C11orf91Q3C1V1 193 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 IGSF21Q96ID5 467 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 FAM167BQ9BTA0 163 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 CINPQ9BW66 212 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 YIPF3Q9GZM5 350 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 ILKAPQ9H0C8 392 aaPredicted RBP16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 ALG9Q9H6U8 611 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 RNPEPL1Q9HAU8 725 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 NSMCE4AQ9NXX6 385 aa16.91■□□□□ 0.3
LAPTM4B-201ENST00000445593 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 GPR39O43194 453 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 ACRP10323 421 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 OXCT1P55809 520 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 NRG1Q02297 640 aaPredicted RBP16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 PARP15Q460N3 678 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 PPM1LQ5SGD2 360 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 LIPMQ5VYY2 423 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZYG11AQ6WRX3 759 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 CARNMT1Q8N4J0 409 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 CATSPER2Q96P56 530 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 FAM96AQ9H5X1 160 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 TRPM5Q9NZQ8 1165 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZNF195O14628 629 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 PRAMEF11O60813 436 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 GOT2P00505 430 aaKnown RBP16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 IGLV3-27P01718 113 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCL5P13501 91 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 GJA1P17302 382 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 HOXD9P28356 352 aaPredicted RBP16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 TWF1Q12792 350 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 PREPLQ4J6C6 727 aaPredicted RBP16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 LPCAT1Q8NF37 534 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 SPATA17Q96L03 361 aa16.9■□□□□ 0.3
LAPTM4B-201ENST00000445593 DRGXA6NNA5 263 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 HOXA2O43364 376 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 SERPINF2P08697 491 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 MBL2P11226 248 aaPredicted RBP16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 COL6A1P12109 1028 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 APLP1P51693 650 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 ATXN3P54252 364 aaPredicted RBP16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 SEMA3AQ14563 771 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 RABGAP1LQ5R372 815 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 HECTD2Q5U5R9 776 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 LRRC49Q8IUZ0 686 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 MTRRQ9UBK8 725 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 PLA2G4CQ9UP65 541 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 FAM50BQ9Y247 325 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 YIPF1Q9Y548 306 aa16.89■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCDC162PA2VCL2 907 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 LDB2O43679 373 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 BNIP3LO60238 219 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 STC2O76061 302 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 PMLP29590 882 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 SH2D4BQ5SQS7 431 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 TXNDC8Q6A555 127 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 CILP2Q8IUL8 1156 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 STMN2Q93045 179 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms