RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FCRL5Q96RD9 977 aa17.37■□□□□ 0.37
LIME1-202ENST00000444951 TRIM31Q9BZY9 425 aa17.37■□□□□ 0.37
LIME1-202ENST00000444951 MKRN2Q9H000 416 aaKnown RBP17.37■□□□□ 0.37
LIME1-202ENST00000444951 L2HGDHQ9H9P8 463 aa17.37■□□□□ 0.37
LIME1-202ENST00000444951 RRAGDQ9NQL2 400 aaPredicted RBP17.37■□□□□ 0.37
LIME1-202ENST00000444951 MBD1Q9UIS9 605 aaPredicted RBP17.37■□□□□ 0.37
LIME1-202ENST00000444951 CFAP47Q6ZTR5 3102 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.36■□□□□ 0.37
LIME1-202ENST00000444951 E7EVH7 732 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 PLK4O00444 970 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 PRNPP04156 253 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 CES1P23141 567 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 SERPINA4P29622 427 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 ADCY8P40145 1251 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 P2RY2P41231 377 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 MAPK8P45983 427 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 RPS14P62263 151 aaKnown RBP17.36■□□□□ 0.37
LIME1-202ENST00000444951 TRAF2Q12933 501 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 DHX34Q14147 1143 aaKnown RBP17.36■□□□□ 0.37
LIME1-202ENST00000444951 SPARCL1Q14515 664 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 ALG1LQ6GMV1 187 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 C8orf74Q6P047 294 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 IPMKQ8NFU5 416 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 GORASP1Q9BQQ3 440 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 MLPHQ9BV36 600 aaPredicted RBP17.36■□□□□ 0.37
LIME1-202ENST00000444951 RSPH9Q9H1X1 276 aaPredicted RBP17.36■□□□□ 0.37
LIME1-202ENST00000444951 ETNK1Q9HBU6 452 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 FAM153AQ9UHL3 310 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 PPM1HQ9ULR3 514 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 RAI2Q9Y5P3 530 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 PI4KAP42356 2102 aa17.36■□□□□ 0.37
LIME1-202ENST00000444951 CEP295Q9C0D2 2601 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 ASCC3Q8N3C0 2202 aaKnown RBP17.35■□□□□ 0.37
LIME1-202ENST00000444951 C4orf47A7E2U8 309 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 C1QTNF3-AMACRE9PGA6 284 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 GIPC1O14908 333 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 ALOX15BO15296 676 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 MID1O15344 667 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 KCNK5O95279 499 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 GABRG2P18507 467 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 NDUFV2P19404 249 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 SLC8A1P32418 973 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 DHPSP49366 369 aaPredicted RBP17.35■□□□□ 0.37
LIME1-202ENST00000444951 GEMP55040 296 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 PTK6Q13882 451 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 CST6Q15828 149 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 RALGPS1Q5JS13 557 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 ARMCX6Q7L4S7 300 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 CYP2U1Q7Z449 544 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 MAATS1Q7Z4T9 603 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 TMIEQ8NEW7 156 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 PRCCQ92733 491 aaPredicted RBP17.35■□□□□ 0.37
LIME1-202ENST00000444951 SLCO2A1Q92959 643 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 SIPA1Q96FS4 1042 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 TUBGCP5Q96RT8 1024 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 LRRC1Q9BTT6 524 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 CPEB1Q9BZB8 566 aaKnown RBP17.35■□□□□ 0.37
LIME1-202ENST00000444951 SUV39H2Q9H5I1 410 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 CD248Q9HCU0 757 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 CHKBQ9Y259 395 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 NEU2Q9Y3R4 380 aa17.35■□□□□ 0.37
LIME1-202ENST00000444951 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 CDX4O14627 284 aaPredicted RBP17.34■□□□□ 0.37
LIME1-202ENST00000444951 ANXA9O76027 345 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 ALDH1A2O94788 518 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 DNTTP04053 509 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 ACADMP11310 421 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 FDFT1P37268 417 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 PTGER3P43115 390 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
LIME1-202ENST00000444951 WNT3AP56704 352 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 SLC7A5Q01650 507 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 OLIG2Q13516 323 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 CKAP5Q14008 2032 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 GRM3Q14832 879 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 MAP7D1Q3KQU3 841 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 LRRC73Q5JTD7 316 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 FAM46CQ5VWP2 391 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 PSAPL1Q6NUJ1 521 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 C4orf22Q6V702 233 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 SYDE1Q6ZW31 735 aaPredicted RBP17.34■□□□□ 0.37
LIME1-202ENST00000444951 TMEFF1Q8IYR6 380 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 ASPMQ8IZT6 3477 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 MMGT1Q8N4V1 131 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 SLC25A41Q8N5S1 370 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 PDCD7Q8N8D1 485 aaKnown RBP17.34■□□□□ 0.37
LIME1-202ENST00000444951 ARRDC3Q96B67 414 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 MRGPRX1Q96LB2 322 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 APOL2Q9BQE5 337 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 FICDQ9BVA6 458 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 FSD1LQ9BXM9 530 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 OSBPL1AQ9BXW6 950 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 DPH5Q9H2P9 285 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 FBRSQ9HAH7 460 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 DYRK4Q9NR20 520 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 AAR2Q9Y312 384 aaKnown RBP17.34■□□□□ 0.37
LIME1-202ENST00000444951 PCDHB9Q9Y5E1 797 aa17.34■□□□□ 0.37
LIME1-202ENST00000444951 CEP192Q8TEP8 1941 aa17.33■□□□□ 0.37
LIME1-202ENST00000444951 ATXN2Q99700 1313 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms