RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 KLHL8Q9P2G9 620 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CCNL1Q9UK58 526 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CDH7Q9ULB5 785 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 TCAF1Q9Y4C2 921 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 RAD54BQ9Y620 910 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ARAP2Q8WZ64 1704 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 TCRBV5S1A1TA0A578 114 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 DLGAP1O14490 977 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CCNKO75909 580 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MICAL2O94851 1124 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 EDN1P05305 212 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 BMP4P12644 408 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ALOX12P18054 663 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 AGXTP21549 392 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 HOXC13P31276 330 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 RPS9P46781 194 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CDH13P55290 713 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 GJA9P57773 515 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 TAP1Q03518 808 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 IFRD2Q12894 506 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PRKAA1Q13131 559 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 STX5Q13190 355 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 LAMC2Q13753 1193 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 INPP5AQ14642 412 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SMU1Q2TAY7 513 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 TBPL2Q6SJ96 375 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MAMDC4Q6UXC1 1216 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 C15orf39Q6ZRI6 1047 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CDKL3Q8IVW4 592 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 C12orf29Q8N999 325 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SMG8Q8ND04 991 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SEPT8Q92599 483 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 NXNL1Q96CM4 212 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF486Q96H40 463 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 FBXL18Q96ME1 805 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 OLFM1Q99784 485 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 LPIN3Q9BQK8 851 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CHID1Q9BWS9 393 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 C6orf62Q9GZU0 229 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 AS3MTQ9HBK9 375 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MOCS1Q9NZB8 636 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SLCO3A1Q9UIG8 710 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SNX9Q9Y5X1 595 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SNX5Q9Y5X3 404 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ARFGEF1Q9Y6D6 1849 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 LAMB1P07942 1786 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 RNF103O00237 685 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 RAD51BO15315 384 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SEC24AO95486 1093 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 POLBP06746 335 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ASNSP08243 561 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 IFI30P13284 250 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MYF6P23409 242 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CAPGP40121 348 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SLC12A2P55011 1212 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 NCS1P62166 190 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ECT2LQ008S8 904 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CTBP1Q13363 440 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 LAPTM5Q13571 262 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 RABL3Q5HYI8 236 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 C6orf10Q5SRN2 563 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 BROXQ5VW32 411 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 UGT3A1Q6NUS8 523 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CNSTQ6PJW8 725 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 FAM183BPQ6ZVS7 135 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 NEK10Q6ZWH5 1172 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 FAM131BQ86XD5 332 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MMAAQ8IVH4 418 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 HS3ST5Q8IZT8 346 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SFRP1Q8N474 314 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 OR7A2PQ8NGA2 310 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 LILRB4Q8NHJ6 448 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 OTUD5Q96G74 571 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MASTLQ96GX5 879 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 VPS39Q96JC1 886 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF347Q96SE7 839 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CGRRF1Q99675 332 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 BEX2Q9BXY8 128 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MROQ9BYG7 248 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ALOXE3Q9BYJ1 711 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 POMKQ9H5K3 350 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SMPD3Q9NY59 655 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 POLG2Q9UHN1 485 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 IRS2Q9Y4H2 1338 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MICAL3Q7RTP6 2002 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 KIF13BQ9NQT8 1826 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SDHDO14521 159 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PMM2O15305 246 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 XPNPEP2O43895 674 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SNRPB2P08579 225 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SPNP16150 400 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CYP3A5P20815 502 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PTPN7P35236 360 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 STX1BP61266 288 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PRKCEQ02156 737 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 TRIM32Q13049 653 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 E2F2Q14209 437 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms