RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 GPER1Q99527 375 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 H3BNX3 289 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TRIM38O00635 465 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SUV39H1O43463 412 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 PSMG1O95456 288 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 FGBP02675 491 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 LPOP22079 712 aaPredicted RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 SDC2P34741 201 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 PLK1P53350 603 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 EIF5AP63241 154 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 IKBKEQ14164 716 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SPATA19Q7Z5L4 167 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 GPR180Q86V85 440 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 HIPK1Q86Z02 1210 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 FBXW8Q8N3Y1 598 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 LEMD2Q8NC56 503 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 CLP1Q92989 425 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 KCNQ5Q9NR82 932 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SLC12A4Q9UP95 1085 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 DMTF1Q9Y222 760 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TRPV2Q9Y5S1 764 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SQORQ9Y6N5 450 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 GAKO14976 1311 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 PRR36Q9H6K5 1346 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 DLC1Q96QB1 1528 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SERPINA6P08185 405 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 AMPD1P23109 780 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TNFRSF8P28908 595 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ENPEPQ07075 957 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 LRRC38Q5VT99 294 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SCUBE3Q8IX30 993 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SEMA4DQ92854 862 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 GSDMCQ9BYG8 508 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ETNK2Q9NVF9 386 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ATXN2Q99700 1313 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 MT-CO1P00395 513 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SLC35G4P0C7Q5 338 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 MIPP30301 263 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 HOXC12P31275 282 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 RPL5P46777 297 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 AIF1P55008 147 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 DRG2P55039 364 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 RAB10P61026 200 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 DLG4P78352 724 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 BMPR2Q13873 1038 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 FBXO16Q8IX29 292 aaPredicted RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 SLC9A6Q92581 669 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 CELF6Q96J87 481 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 PLEKHG4BQ96PX9 1271 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 GRIP2Q9C0E4 1043 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ABCB10Q9NRK6 738 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 MSRAQ9UJ68 235 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.71□□□□□ -1.34
USP46-201ENST00000441222 DHRS7Q9Y394 339 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 RAP2CQ9Y3L5 183 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 AK5Q9Y6K8 562 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 UNC13BO14795 1591 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 OR14I1A6ND48 311 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TPP1O14773 563 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SLC28A2O43868 658 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 PLIN3O60664 434 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TGDSO95455 350 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 NTRK1P04629 796 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 GIMD1P0DJR0 217 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 THRBP10828 461 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 INSRRP14616 1297 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 CCNB1P14635 433 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ATP4AP20648 1035 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 RPL21P46778 160 aaKnown RBP6.71□□□□□ -1.34
USP46-201ENST00000441222 RIPPLY1Q0D2K3 151 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 FAM189A2Q15884 450 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TYSND1Q2T9J0 566 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 VPS26BQ4G0F5 336 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ERICH5Q6P6B1 374 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TMEM192Q8IY95 271 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 PANX1Q96RD7 426 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 CCDC28BQ9BUN5 200 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 NEUROD4Q9HD90 331 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 ASAH2Q9NR71 780 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 MAGEL2Q9UJ55 1249 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 SNX7Q9UNH6 387 aa6.71□□□□□ -1.34
USP46-201ENST00000441222 BCORL1Q5H9F3 1711 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 TCEA3O75764 348 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 FSBPO95073 299 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 EIF2S3P41091 472 aaKnown RBP6.7□□□□□ -1.34
USP46-201ENST00000441222 BUD31P41223 144 aaPredicted RBP6.7□□□□□ -1.34
USP46-201ENST00000441222 MANFP55145 182 aaKnown RBP6.7□□□□□ -1.34
USP46-201ENST00000441222 HERVK_113P62684 666 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 EN1Q05925 392 aaPredicted RBP6.7□□□□□ -1.34
USP46-201ENST00000441222 HSPA14Q0VDF9 509 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 XKR6Q5GH73 641 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 CKAP2Q8WWK9 683 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 SLC4A9Q96Q91 983 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 GBA2Q9HCG7 927 aaPredicted RBP6.7□□□□□ -1.34
USP46-201ENST00000441222 GPATCH2LQ9NWQ4 482 aa6.7□□□□□ -1.34
USP46-201ENST00000441222 ZNHIT2Q9UHR6 403 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms