RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TBC1D1Q86TI0 1168 aaPredicted RBP5.06□□□□□ -1.6
PFDN4-202ENST00000441080 ADAMTS15Q8TE58 950 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 OIT3Q8WWZ8 545 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 GTF3C6Q969F1 213 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 SMARCE1Q969G3 411 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 PABPC5Q96DU9 382 aaKnown RBP5.06□□□□□ -1.6
PFDN4-202ENST00000441080 PLEKHA4Q9H4M7 779 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 PLK2Q9NYY3 685 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 CISD1Q9NZ45 108 aaKnown RBP5.06□□□□□ -1.6
PFDN4-202ENST00000441080 MYO6Q9UM54 1294 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 LSM4Q9Y4Z0 139 aaKnown RBP5.06□□□□□ -1.6
PFDN4-202ENST00000441080 CAPN7Q9Y6W3 813 aa5.06□□□□□ -1.6
PFDN4-202ENST00000441080 EIF3CLB5ME19 914 aaKnown RBP5.05□□□□□ -1.6
PFDN4-202ENST00000441080 SEC14L5O43304 696 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 BAIAP3O94812 1187 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 SOX30O94993 753 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 NDUFB4O95168 129 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 CCNDBP1O95273 360 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 HOXB5P09067 269 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 ITGAXP20702 1163 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 ARRB2P32121 409 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 CDAP32320 146 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 RPS3AP61247 264 aaKnown RBP5.05□□□□□ -1.6
PFDN4-202ENST00000441080 OLR1P78380 273 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 TMEM115Q12893 351 aaPredicted RBP5.05□□□□□ -1.6
PFDN4-202ENST00000441080 CCNG2Q16589 344 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 CCDC30Q5VVM6 783 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 C1orf122Q6ZSJ8 110 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 PRR26Q8N8Z3 221 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 ARRDC2Q8TBH0 407 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 TRIB2Q92519 343 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 ERGIC1Q969X5 290 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 ZBTB9Q96C00 473 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 ZNF570Q96NI8 536 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 MAGEE1Q9HCI5 957 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 KRT84Q9NSB2 600 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 SLC6A13Q9NSD5 602 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 OR6C3Q9NZP0 311 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 INTS6Q9UL03 887 aaKnown RBP5.05□□□□□ -1.6
PFDN4-202ENST00000441080 AAR2Q9Y312 384 aaKnown RBP5.05□□□□□ -1.6
PFDN4-202ENST00000441080 PAM16Q9Y3D7 125 aa5.05□□□□□ -1.6
PFDN4-202ENST00000441080 TDRD9Q8NDG6 1382 aaKnown RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 ITIH6Q6UXX5 1313 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 IGHV4-28A0A0C4DH34 117 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 PGPEP1LA6NFU8 196 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 F5H0A9 414 aaPredicted RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 MMP2P08253 660 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 AGAP20933 346 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 PSMA4P25789 261 aaKnown RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 CHATP28329 748 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 SHMT1P34896 483 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 LINC00205P59089 165 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 ABATP80404 500 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 SIM2Q14190 667 aaPredicted RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 FGFBP1Q14512 234 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 ALG11Q2TAA5 492 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 COL28A1Q2UY09 1125 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 C9orf47Q6ZRZ4 202 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 GSTA5Q7RTV2 222 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 SLC35F3Q8IY50 421 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 SCCPDHQ8NBX0 429 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 INTS12Q96CB8 462 aaKnown RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 TKTL2Q9H0I9 626 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 DDX4Q9NQI0 724 aaKnown RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 DIAPH3Q9NSV4 1193 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 LIMA1Q9UHB6 759 aaKnown RBP5.04□□□□□ -1.6
PFDN4-202ENST00000441080 HAO1Q9UJM8 370 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 PNMA2Q9UL42 364 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 TNFRSF18Q9Y5U5 241 aa5.04□□□□□ -1.6
PFDN4-202ENST00000441080 UTYO14607 1347 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 A0A1B0GVM2 712 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 TIMM23O14925 209 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 CD58P19256 250 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 CAPN3P20807 821 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 PIGAP37287 484 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 RPL3P39023 403 aaKnown RBP5.03□□□□□ -1.6
PFDN4-202ENST00000441080 PBX3P40426 434 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 RXRGP48443 463 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 AMTP48728 403 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 DCAF7P61962 342 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 GOLGA8DPQ0D2H9 430 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 FRG1Q14331 258 aaKnown RBP5.03□□□□□ -1.6
PFDN4-202ENST00000441080 RALBP1Q15311 655 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 SHBQ15464 509 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 DPCR1Q3MIW9 517 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 SGO1Q5FBB7 561 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
PFDN4-202ENST00000441080 FBXO46Q6PJ61 603 aaPredicted RBP5.03□□□□□ -1.6
PFDN4-202ENST00000441080 TSSK4Q6SA08 328 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 PXKQ7Z7A4 578 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 ZBTB2Q8N680 514 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 BEST2Q8NFU1 509 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 OR14A16Q8NHC5 309 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 HUS1BQ8NHY5 278 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 PSPC1Q8WXF1 523 aaKnown RBP5.03□□□□□ -1.6
PFDN4-202ENST00000441080 FAM149B1Q96BN6 582 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 PERPQ96FX8 193 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 TXNDC15Q96J42 360 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 CAMK1GQ96NX5 476 aa5.03□□□□□ -1.6
PFDN4-202ENST00000441080 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms