RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 TEX12Q9BXU0 123 aa20.64■□□□□ 0.89
FMR1-208ENST00000440235 PLGRKTQ9HBL7 147 aa20.64■□□□□ 0.89
FMR1-208ENST00000440235 UXTQ9UBK9 157 aaPredicted RBP20.64■□□□□ 0.89
FMR1-208ENST00000440235 MDM4O15151 490 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 ARIH2O95376 493 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 CCNA2P20248 432 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 CES1P23141 567 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 FGD3Q5JSP0 725 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 OR56A4Q8NGH8 313 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 H2AFY2Q9P0M6 372 aaPredicted RBP20.63■□□□□ 0.89
FMR1-208ENST00000440235 SLC15A5A6NIM6 579 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 ASNA1O43681 348 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 WBP4O75554 376 aaKnown RBP20.63■□□□□ 0.89
FMR1-208ENST00000440235 NMBRP28336 390 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 CCR10P46092 362 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 MFSD14CQ5VZR4 134 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 PAOXQ6QHF9 649 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 ZDHHC17Q8IUH5 632 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 ZNF567Q8N184 647 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 KCTD15Q96SI1 283 aaPredicted RBP20.63■□□□□ 0.89
FMR1-208ENST00000440235 HMG20AQ9NP66 347 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 AAASQ9NRG9 546 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.63■□□□□ 0.89
FMR1-208ENST00000440235 CLUHO75153 1309 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 PIPSLA2A3N6 862 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 EDIL3O43854 480 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 CLIC3O95833 236 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 S100A3P33764 101 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 CHI3L1P36222 383 aaPredicted RBP20.63■□□□□ 0.89
FMR1-208ENST00000440235 GGT5P36269 586 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 ST13P50502 369 aaKnown RBP20.63■□□□□ 0.89
FMR1-208ENST00000440235 MAPKAPK3Q16644 382 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 DDR2Q16832 855 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 PLEKHM3Q6ZWE6 761 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 HPS1Q92902 700 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 PTCD3Q96EY7 689 aaKnown RBP20.63■□□□□ 0.89
FMR1-208ENST00000440235 CDCA5Q96FF9 252 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 RTKNQ9BST9 563 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 TRPC4Q9UBN4 977 aa20.63■□□□□ 0.89
FMR1-208ENST00000440235 SPATA31C2B4DYI2 1134 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 CST1P01037 141 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 IMPDH2P12268 514 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 FSTL5Q8N475 847 aaPredicted RBP20.62■□□□□ 0.89
FMR1-208ENST00000440235 SLC35B2Q8TB61 432 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 OSBPL11Q9BXB4 747 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 SPATA16Q9BXB7 569 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 NUAK2Q9H093 628 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 ATAD3AQ9NVI7 634 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 VWA7Q9Y334 891 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 PRR23D1E9PI22 279 aaPredicted RBP20.62■□□□□ 0.89
FMR1-208ENST00000440235 PRR23D2P0DMB1 279 aaPredicted RBP20.62■□□□□ 0.89
FMR1-208ENST00000440235 ITGALP20701 1170 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 ADRA1BP35368 520 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 NADK2Q4G0N4 442 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 CEP78Q5JTW2 689 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 SPANXN2Q5MJ10 180 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 CDHR3Q6ZTQ4 885 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 PRKD2Q9BZL6 878 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 SDCBP2Q9H190 292 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 FARP1Q9Y4F1 1045 aaPredicted RBP20.62■□□□□ 0.89
FMR1-208ENST00000440235 CITO14578 2027 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 TTLL13PA6NNM8 815 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 H3BSA7 217 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 LIN7AO14910 233 aaPredicted RBP20.62■□□□□ 0.89
FMR1-208ENST00000440235 FOXD2O60548 495 aaPredicted RBP20.62■□□□□ 0.89
FMR1-208ENST00000440235 TNFRSF21O75509 655 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 TRAF3Q13114 568 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 BBS7Q8IWZ6 715 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 CFAP52Q8N1V2 620 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 ZNF540Q8NDQ6 660 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 SH3BP1Q9Y3L3 701 aa20.62■□□□□ 0.89
FMR1-208ENST00000440235 CDH3P22223 829 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 BRCC3P46736 316 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 ANGPT1Q15389 498 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 DDI2Q5TDH0 399 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 HIPK1Q86Z02 1210 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 PNPT1Q8TCS8 783 aaKnown RBP20.61■□□□□ 0.89
FMR1-208ENST00000440235 DCAKDQ8WVC6 231 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 SMARCD1Q96GM5 515 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 RHOJQ9H4E5 214 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 PRPF19Q9UMS4 504 aaKnown RBP20.61■□□□□ 0.89
FMR1-208ENST00000440235 AZIN1O14977 448 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 HCRTO43612 131 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 EFNA1P20827 205 aaPredicted RBP20.61■□□□□ 0.89
FMR1-208ENST00000440235 TAS2R39P59534 338 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 VGLL4Q14135 290 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 POM121L1PQ3SYA9 428 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 NAT8LQ8N9F0 302 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 MRPL57Q9BQC6 102 aaKnown RBP20.61■□□□□ 0.89
FMR1-208ENST00000440235 RMND5AQ9H871 391 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 CXorf21Q9HAI6 301 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 ARHGEF4Q9NR80 690 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 ANKRD6Q9Y2G4 727 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 ZNF541Q9H0D2 1346 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 CILPO75339 1184 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 TGDSO95455 350 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 CYBBP04839 570 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 FESP07332 822 aa20.61■□□□□ 0.89
FMR1-208ENST00000440235 MBL2P11226 248 aaPredicted RBP20.61■□□□□ 0.89
FMR1-208ENST00000440235 SQLEQ14534 574 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms