RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C1orf50Q9BV19 199 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ULBP1Q9BZM6 244 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SPON1Q9HCB6 807 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 EIF2B3Q9NR50 452 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 ERAP1Q9NZ08 941 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ATP11BQ9Y2G3 1177 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 CSADQ9Y600 493 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SUPT3HB4E1H0 165 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SNAP29O95721 258 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 USP17L7P0C7H9 530 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 CD247P20963 164 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ELK4P28324 431 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 HADHAP40939 763 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SLC1A2P43004 574 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 RPS9P46781 194 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 CD97P48960 835 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PIGFQ07326 219 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 HERC3Q15034 1050 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TGFBIQ15582 683 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PGS1Q32NB8 556 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 FBXO47Q5MNV8 452 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 C6orf183Q5T699 404 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 HFE2Q6ZVN8 426 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ERMP1Q7Z2K6 904 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 MIER2Q8N344 545 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 DNERQ8NFT8 737 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 STYXQ8WUJ0 223 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SEPT8Q92599 483 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 WNT8BQ93098 351 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PPP1R14BQ96C90 147 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 LRCH3Q96II8 777 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 BIRC8Q96P09 236 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 GPR22Q99680 433 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 RAD21L1Q9H4I0 556 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PIGVQ9NUD9 493 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SMPD3Q9NY59 655 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 ANAPC2Q9UJX6 822 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 NUDT5Q9UKK9 219 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PADI4Q9UM07 663 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PCDHGA4Q9Y5G9 962 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 IPO13O94829 963 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 PGK1P00558 417 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 VARSP26640 1264 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 ADSLP30566 484 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 BMXP51813 675 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TUBA4AP68366 448 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 CCNA1P78396 465 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PDCD4Q53EL6 469 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 DNAJC14Q6Y2X3 702 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 STRADAQ7RTN6 431 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 LINC00523Q86TU6 105 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 RALGPS2Q86X27 583 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 SLC15A4Q8N697 577 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SPPL2BQ8TCT7 592 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TRPC4APQ8TEL6 797 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 GPR20Q99678 358 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TKTL2Q9H0I9 626 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SARS2Q9NP81 518 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 SEMA4BQ9NPR2 832 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 PDGFCQ9NRA1 345 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ATAD3AQ9NVI7 634 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 RBM22Q9NW64 420 aaKnown RBP eCLIP9.1□□□□□ -0.95
COPB1-202ENST00000439561 IFT80Q9P2H3 777 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 OR12D3Q9UGF7 316 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SEPT3Q9UH03 358 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PIN4Q9Y237 131 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 KPNA4O00629 521 aaPredicted RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 NOS2P35228 1153 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 ADRA1BP35368 520 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 DMPKQ09013 629 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 TIGD2Q4W5G0 525 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 RABL3Q5HYI8 236 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 PCID2Q5JVF3 399 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 GPR158Q5T848 1215 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 FKBP1CQ5VVH2 108 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 CYS1Q717R9 158 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 KIAA2013Q8IYS2 634 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 ZCCHC7Q8N3Z6 543 aaKnown RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 CHST13Q8NET6 341 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 C19orf60Q96EN9 201 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 YIPF2Q9BWQ6 316 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 RPF2Q9H7B2 306 aaKnown RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 TBCCD1Q9NVR7 557 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 UTP6Q9NYH9 597 aaKnown RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 RAD54BQ9Y620 910 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 AURKAO14965 403 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 SPTLC1O15269 473 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 RSL1D1O76021 490 aaKnown RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 SIX3O95343 332 aaPredicted RBP9.09□□□□□ -0.95
COPB1-202ENST00000439561 BMP10O95393 424 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 COL6A2P12110 1019 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 ZNF12P17014 697 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 TTKP33981 857 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 GLUD2P49448 558 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 TSPY1Q01534 308 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 RBBP7Q16576 425 aa9.09□□□□□ -0.95
COPB1-202ENST00000439561 TMTC4Q5T4D3 741 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms