RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 HDAC7Q8WUI4 952 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 RUFY2Q8WXA3 655 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 FAM122AQ96E09 287 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 PHF21BQ96EK2 531 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 RRP36Q96EU6 259 aaKnown RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZNF419Q96HQ0 510 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 FAM84BQ96KN1 310 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 FRG2BQ96QU4 278 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 SEC62Q99442 399 aaKnown RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 KLHL31Q9H511 634 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 ACTR5Q9H9F9 607 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 KRCC1Q9NPI7 259 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 ALKBH4Q9NXW9 302 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 PDP2Q9P2J9 529 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 UPB1Q9UBR1 384 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 OSGIN2Q9Y236 505 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 DUOX2Q9NRD8 1548 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 PCNTO95613 3336 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 SSH2Q76I76 1423 aa3.53□□□□□ -1.85
HMGB3P12-201ENST00000438745 CASKIN1Q8WXD9 1431 aa3.53□□□□□ -1.85
HMGB3P12-201ENST00000438745 BRD4O60885 1362 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 KIAA0232Q92628 1395 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ARHGEF5Q12774 1597 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 TMEM247A6NEH6 219 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 SH2D7A6NKC9 451 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 STRNO43815 780 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 METTL18O95568 372 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 CYP1A2P05177 515 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 IFIT1P09914 478 aaKnown RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 MYZAPP0CAP1 466 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 FCGR2AP12318 317 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 UNGP13051 313 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 TNNT1P13805 278 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 HNF1BP35680 557 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 CRYZQ08257 329 aaKnown RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 GALNT2Q10471 571 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 DEFB115Q30KQ5 88 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 C5orf22Q49AR2 442 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 FBXO43Q4G163 708 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZNF585BQ52M93 769 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 SLC9C2Q5TAH2 1124 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM171A1Q5VUB5 890 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZNF324BQ6AW86 544 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 NAPEPLDQ6IQ20 393 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 RETSATQ6NUM9 610 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 AADACL2Q6P093 401 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 DLK2Q6UY11 383 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 Q6ZTK2 550 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 C18orf65Q6ZTR6 163 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZNF367Q7RTV3 350 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 GALNT7Q86SF2 657 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ADGRG6Q86SQ4 1221 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZDHHC23Q8IYP9 409 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 CMASQ8NFW8 434 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 TMEM163Q8TC26 289 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 NCSTNQ92542 709 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 NEUROG1Q92886 237 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 PHF7Q9BWX1 381 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 CADM1Q9BY67 442 aaKnown RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 DCLK3Q9C098 648 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 TAOK3Q9H2K8 898 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 SLCO5A1Q9H2Y9 848 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 SLC32A1Q9H598 525 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 CD93Q9NPY3 652 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 WASH6PQ9NQA3 447 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 RRP7BPQ9NSQ0 103 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 GJD2Q9UKL4 321 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 INSL5Q9Y5Q6 135 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 PTGDR2Q9Y5Y4 395 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 LRRIQ1Q96JM4 1722 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ATP7BP35670 1465 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 NAIPQ13075 1403 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 ERBINQ96RT1 1412 aa3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 GOLGB1Q14789 3259 aaKnown RBP3.52□□□□□ -1.85
HMGB3P12-201ENST00000438745 CDC42BPGQ6DT37 1551 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 NOTCH4Q99466 2003 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 A0A1B0GVC2 190 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 A0A1B0GVT2 93 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 TARSL2A2RTX5 802 aaKnown RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 C17orf100A8MU93 164 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 PRSS44E7EML9 344 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 STMND1H3BQB6 276 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 SOX30O94993 753 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 KCNJ4P48050 445 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 RPP30P78346 268 aaKnown RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 KEAP1Q14145 624 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 GPR68Q15743 365 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 Q6ZSV7 163 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 LRRC8DQ7L1W4 858 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 CADM3Q8N126 398 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 GHDCQ8N2G8 530 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 DPP10Q8N608 796 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 SCAIQ8N9R8 606 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 TEX45Q8NA69 505 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms