RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MAP2K2P36507 400 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 SLC26A3P40879 764 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 COPAP53621 1224 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 KLF10Q13118 480 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 TRMT5Q32P41 509 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 TMEM207Q6UWW9 146 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 ANKRD33Q7Z3H0 272 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 SPNS2Q8IVW8 549 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 SPATA6LQ8N4H0 392 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 CPSF7Q8N684 471 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 POU5F2Q8N7G0 328 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 OR7D4Q8NG98 312 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 GABPB2Q8TAK5 448 aaPredicted RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 IGSF21Q96ID5 467 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 CLPTM1LQ96KA5 538 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 PSKH2Q96QS6 385 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 PANX3Q96QZ0 392 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 CCDC28BQ9BUN5 200 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 TCF7L2Q9NQB0 619 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 ACSS2Q9NR19 701 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 MAN1C1Q9NR34 630 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 STX18Q9P2W9 335 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 VTI1BQ9UEU0 232 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 OGDHLQ9ULD0 1010 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 OR51F1A6NGY5 319 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 MEI4A8MW99 385 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 KDELR3O43731 214 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 CCNT2O60583 730 aaKnown RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 STC2O76061 302 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 PARNO95453 639 aaKnown RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 LTA4HP09960 611 aaKnown RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 KCNA5P22460 613 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 OR1D2P34982 312 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 PTDSS1P48651 473 aaKnown RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 SUOXP51687 545 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 SGSHP51688 502 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 CDKN2DP55273 166 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ACTR3P61158 418 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ASPHQ12797 758 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 LAMB3Q13751 1172 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF235Q14590 738 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 FSCBQ5H9T9 825 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 HECTD3Q5T447 861 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 SEL1L3Q68CR1 1132 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF549Q6P9A3 640 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 CHST9Q7L1S5 443 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 PIWIL4Q7Z3Z4 852 aaKnown RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF354CQ86Y25 554 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 MYLK4Q86YV6 388 aaPredicted RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 PNPLA1Q8N8W4 532 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 KCNV2Q8TDN2 545 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ANKRD49Q8WVL7 239 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 CMTM5Q96DZ9 223 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 TSPAN17Q96FV3 270 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 MAELQ96JY0 434 aaKnown RBP14.02□□□□□ -0.16
HOXC4-202ENST00000430889 FAM161BQ96MY7 647 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 THTPAQ9BU02 230 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ACTL7AQ9Y615 435 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 DENND4CQ5VZ89 1909 aa14.02□□□□□ -0.16
HOXC4-202ENST00000430889 ILVBLA1L0T0 632 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 E9PBE3 544 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 H0Y3Z8 333 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 CCL22O00626 93 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SLC22A2O15244 555 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 DCXO43602 365 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 KLHL41O60662 606 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 PQBP1O60828 265 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 NDST3O95803 873 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 F11P03951 625 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 JUNP05412 331 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 FDXRP22570 491 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 RGRP47804 291 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SLC11A2P49281 568 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 RPS24P62847 133 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SLC25A3Q00325 362 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 DSG1Q02413 1049 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 CSHL1Q14406 222 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 RCN1Q15293 331 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 FAM83EQ2M2I3 478 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 LSM12Q3MHD2 195 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 AGAP9Q5VTM2 703 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 RIPOR1Q6ZS17 1223 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 PTAR1Q7Z6K3 402 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SHKBP1Q8TBC3 707 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ACTRT2Q8TDY3 377 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SH3RF2Q8TEC5 729 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 WBP2Q969T9 261 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 TRMT2BQ96GJ1 504 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 DNAJC1Q96KC8 554 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 TBATAQ96M53 351 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 KLF16Q9BXK1 252 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 OSBPL1AQ9BXW6 950 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms