RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 ARL4AP40617 200 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 RABIFP47224 123 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 SCNN1BP51168 640 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 ZNF135P52742 658 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 MAXP61244 160 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 NSUN2Q08J23 767 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 TBX2Q13207 712 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 ZNF211Q13398 564 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 DPYSL3Q14195 570 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 TMCO3Q6UWJ1 677 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 LZTR1Q8N653 840 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 PLA2G15Q8NCC3 412 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 ZNF548Q8NEK5 533 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 HCAR2Q8TDS4 363 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 CXorf40AQ8TE69 158 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 IFT43Q96FT9 208 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 TUBGCP5Q96RT8 1024 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 CINPQ9BW66 212 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-204ENST00000430682 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 CTTNBP2NLQ9P2B4 639 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 PCDHGC4Q9Y5F7 938 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 A0A0U1RQS6 177 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 K7ESM1 405 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 MFAP3LO75121 409 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 CELA2BP08218 269 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-204ENST00000430682 CKMT2P17540 419 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 SSR1P43307 286 aaKnown RBP12.6□□□□□ -0.39
SMPD4-204ENST00000430682 SLC10A2Q12908 348 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-204ENST00000430682 TRAF2Q12933 501 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 C1orf61Q13536 156 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 TMCO4Q5TGY1 634 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 NCBP2-AS2Q69YL0 99 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 LIPIQ6XZB0 460 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 PARGQ86W56 976 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 DCP2Q8IU60 420 aaKnown RBP12.6□□□□□ -0.39
SMPD4-204ENST00000430682 PQLC3Q8N755 202 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 ZNF599Q96NL3 588 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 CLPBQ9H078 707 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 ATP13A3Q9H7F0 1226 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 NOD2Q9HC29 1040 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 ABHD10Q9NUJ1 306 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 PCDHGA1Q9Y5H4 931 aa12.6□□□□□ -0.39
SMPD4-204ENST00000430682 SSU72P8A0A1W2PR75 194 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 TMEM8BA6NDV4 472 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 TMEM110-MUSTN1A8MSY1 372 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 SCAMP1O15126 338 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 CBFA2T2O43439 604 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 HTRA2O43464 458 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 H2AFZP0C0S5 128 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 JUNDP17535 347 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 ACP1P24666 158 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 SERPINA4P29622 427 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 HNRNPKP61978 463 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 BCL2L1Q07817 233 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 ELP6Q0PNE2 266 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 KRT81Q14533 505 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 RFTN1Q14699 578 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 GRM3Q14832 879 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 PAFAH1B3Q15102 231 aaKnown RBP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 HES3Q5TGS1 186 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 BRAT1Q6PJG6 821 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 H2AFVQ71UI9 128 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 PROSER1Q86XN7 944 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 SLC35G2Q8TBE7 412 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 FAM174AQ8TBP5 190 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 TSACCQ96A04 125 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-204ENST00000430682 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
SMPD4-204ENST00000430682 AQP9O43315 295 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 RECQL5O94762 991 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TPM3P06753 285 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 C1SP09871 688 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-204ENST00000430682 SUOXP51687 545 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 AP1S1P61966 158 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 YPEL5P62699 121 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 GBE1Q04446 702 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 CYP4F3Q08477 520 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMPD4-204ENST00000430682 ATMQ13315 3056 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 INPP5AQ14642 412 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 MESDQ14696 234 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 LRRC14Q15048 493 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 AGERQ15109 404 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TCEA2Q15560 299 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 DEFB133Q30KQ1 61 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TMPRSS12Q86WS5 348 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 PHACTR4Q8IZ21 702 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 CBARPQ8N350 705 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms