RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CHERPQ8IWX8 916 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CCNYL1Q8N7R7 359 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NSMCE2Q96MF7 247 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 RNF145Q96MT1 663 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 HSD3B7Q9H2F3 369 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 COL6A2P12110 1019 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ETS2P15036 469 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 AKT1P31749 480 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CD81P60033 236 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NME3Q13232 169 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CDNFQ49AH0 187 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PLEKHG4Q58EX7 1191 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 MFSD2AQ8NA29 543 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TBATAQ96M53 351 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PLEKHA6Q9Y2H5 1048 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDHGB3Q9Y5G1 929 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PAHP00439 452 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TGFB3P10600 412 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 GNPDA1P46926 289 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 FOXD4Q12950 439 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 AGAP9Q5VTM2 703 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NLGN1Q8N2Q7 840 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ATPAF2Q8N5M1 289 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 LRRC57Q8N9N7 239 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ZNF285Q96NJ3 590 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PRKD2Q9BZL6 878 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 DOT1LQ8TEK3 1739 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TOGARAM1Q9Y4F4 1720 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ZW10O43264 779 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 RNASEH1O60930 286 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TCN1P20061 433 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PDK1Q15118 436 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 OGFRL1Q5TC84 451 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CACHD1Q5VU97 1274 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 BRSK2Q8IWQ3 736 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 IL17RBQ9NRM6 502 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 MTMR10Q9NXD2 777 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 POLR2AP24928 1970 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 K7EPI3 171 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TSPAN4O14817 238 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NFKB1P19838 968 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 STXBP2Q15833 593 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 MIER2Q8N344 545 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 C2orf40Q9H1Z8 148 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 MRM3Q9HC36 420 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NEK6Q9HC98 313 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 RAVER2Q9HCJ3 691 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 UBQLN2Q9UHD9 624 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ZFR2Q9UPR6 939 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 LOC100653049A0A140TA62 436 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 H0YGN5 161 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CST8O60676 142 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ABCB7O75027 752 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ITGA2P17301 1181 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PPP3CCP48454 512 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ACTR2P61160 394 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ANKRD60Q9BZ19 345 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ABCB10Q9NRK6 738 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 KLHL21Q9UJP4 597 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 NFS1Q9Y697 457 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CACNA1DQ01668 2161 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SPDYE16A6NNV3 312 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC4A1P02730 911 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ARF4P18085 180 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PPP5CP53041 499 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SMIM11AP58511 58 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SPDYE2Q495Y8 402 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 GDPD1Q8N9F7 314 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TCP10LQ8TDR4 215 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC20A1Q8WUM9 679 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ANKRD49Q8WVL7 239 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TTYH3Q9C0H2 523 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 EBF3Q9H4W6 596 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 NDUFAF4Q9P032 175 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CPSF3Q9UKF6 684 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MED1Q15648 1581 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MSH4O15457 936 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 HUS1O60921 280 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 RPS6KA4O75676 772 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 RAD17O75943 681 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PEX2P28328 305 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 EEPD1Q7L9B9 569 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 BHLHE22Q8NFJ8 381 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PHF10Q8WUB8 498 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SGK3Q96BR1 496 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 NODALQ96S42 347 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MROQ9BYG7 248 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PLLPQ9Y342 182 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ZNFX1Q9P2E3 1918 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 NDUFB5O43674 189 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 NDST1P52848 882 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TYW3Q6IPR3 259 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 DPY19L3Q6ZPD9 716 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ZNF720Q7Z2F6 126 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CCDC71Q8IV32 467 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TBC1D19Q8N5T2 526 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SPRTNQ9H040 489 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms