RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CLCNKBP51801 687 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 TNFAIP2Q03169 654 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-206ENST00000428313 SPATS1Q496A3 300 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 PSMA8Q8TAA3 256 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 DYNC2LI1Q8TCX1 351 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 BTBD2Q9BX70 525 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 IRF2BPLQ9H1B7 796 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 SOX17Q9H6I2 414 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-206ENST00000428313 NAALAD2Q9Y3Q0 740 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 MTF2Q9Y483 593 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-206ENST00000428313 H0Y858 1186 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 NDUFS2O75306 463 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 SEC24AO95486 1093 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 GFAPP14136 432 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 FCHO2Q0JRZ9 810 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 C15orf59Q2T9L4 293 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 PIGZQ86VD9 579 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 SPPL2CQ8IUH8 684 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 CCDC28AQ8IWP9 274 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 C4orf19Q8IY42 314 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 LGI2Q8N0V4 545 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 EMC1Q8N766 993 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 POC5Q8NA72 575 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 PAPD5Q8NDF8 572 aaKnown RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 OR6F1Q8NGZ6 308 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 FIG4Q92562 907 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 CHID1Q9BWS9 393 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 LHX5Q9H2C1 402 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 MUC13Q9H3R2 512 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 DSN1Q9H410 356 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 TLR9Q9NR96 1032 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 ANKRD6Q9Y2G4 727 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 TPST1O60507 370 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 XYLBO75191 536 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 HTR1AP08908 422 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 ATP2B4P23634 1241 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 RRM2P31350 389 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 GP2P55259 537 aaKnown RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 WNT7BP56706 349 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 IRF9Q00978 393 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 TOP3AQ13472 1001 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 MFSD14BQ5SR56 506 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 ZNF544Q6NX49 715 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 TBC1D21Q8IYX1 336 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 BEND7Q8N7W2 519 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 URGCPQ8TCY9 931 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 SLC22A17Q8WUG5 538 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 AFG1LQ8WV93 481 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 OSCP1Q8WVF1 389 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 ARNTL2Q8WYA1 636 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 CERS2Q96G23 380 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 HOPXQ9BPY8 73 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 DGCR6LQ9BY27 220 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 ABCB10Q9NRK6 738 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 PAK1IP1Q9NWT1 392 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-206ENST00000428313 SNX5Q9Y5X3 404 aa16.17■□□□□ 0.18
C9orf3-206ENST00000428313 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 BBIP1A8MTZ0 92 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 FADS2P1A8MWK0 482 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 FAM25AB3EWG3 89 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 FAM25CB3EWG5 89 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 FAM25GB3EWG6 89 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 NPHS1O60500 1241 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 HMGCRP04035 888 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 C2P06681 752 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 NAGLUP54802 743 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 UBXN2AP68543 259 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 CTAG1AP78358 180 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 POU6F1Q14863 301 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 SPANXN3Q5MJ09 141 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ATAD3CQ5T2N8 411 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 DESI1Q6ICB0 168 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ERAP2Q6P179 960 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 TAF2Q6P1X5 1199 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 NEK5Q6P3R8 708 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ADAMTSL2Q86TH1 951 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 XYLT1Q86Y38 959 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 DEPDC7Q96QD5 511 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 COQ7Q99807 217 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ADNPQ9H2P0 1102 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 EIF2B3Q9NR50 452 aaKnown RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 UBA2Q9UBT2 640 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 DSEQ9UL01 958 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 CAB39Q9Y376 341 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ADGRA2Q96PE1 1338 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ZNF99A8MXY4 864 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 UBDO15205 165 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 MFN2O95140 757 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 ATG7O95352 703 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 NDST3O95803 873 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 UMPSP11172 480 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 OXTRP30559 389 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 GJA9P57773 515 aa16.16■□□□□ 0.18
C9orf3-206ENST00000428313 MRPS15P82914 257 aaKnown RBP16.16■□□□□ 0.18
C9orf3-206ENST00000428313 GEN1Q17RS7 908 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms