RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CACNG3O60359 315 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CALCAP01258 141 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 HOXA13P31271 388 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 CSE1LP55060 971 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 DPY19L1Q2PZI1 675 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TKFCQ3LXA3 575 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ZNF618Q5T7W0 954 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KCNT2Q6UVM3 1135 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CERS5Q8N5B7 392 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 EFCAB3Q8N7B9 438 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SIMC1Q8NDZ2 872 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 OR5B17Q8NGF7 314 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 APOL6Q9BWW8 343 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TRIM54Q9BYV2 358 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 NIF3L1Q9GZT8 377 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 DTLQ9NZJ0 730 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MTRRQ9UBK8 725 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ZDHHC2Q9UIJ5 367 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 JAG2Q9Y219 1238 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 OAS3Q9Y6K5 1087 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 PAPPA2Q9BXP8 1791 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 A0A096LPK6 155 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TK2O00142 265 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 HLA-DOAP06340 250 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SNRPB2P08579 225 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 ENDOUP21128 410 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 PSMA2P25787 234 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 POLD2P49005 469 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CDH6P55285 790 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 GABARAPL2P60520 117 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PRKCQQ04759 706 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 INCA1Q0VD86 236 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 MAPRE2Q15555 327 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PYCR3Q53H96 274 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PPM1JQ5JR12 505 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 C6orf141Q5SZD1 244 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BRSK2Q8IWQ3 736 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 DCLK2Q8N568 766 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 JOSD2Q8TAC2 188 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 AURKBQ96GD4 344 aaPredicted RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 ANKHQ9HCJ1 492 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.17□□□□□ -1.58
RIF1-203ENST00000428287 FKBP14Q9NWM8 211 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 AGO2Q9UKV8 859 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 PCDHB4Q9Y5E5 795 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PIK3R2O00459 728 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SLC16A4O15374 487 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 MRPS14O60783 128 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 MATN1P21941 496 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 OSBPP22059 807 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 MAP4P27816 1152 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 SSTR3P32745 418 aaPredicted RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 PTPN9P43378 593 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ISL1P61371 349 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CLCQ05315 142 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 MAPRE1Q15691 268 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 TIGD2Q4W5G0 525 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TSTD2Q5T7W7 516 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CRTC3Q6UUV7 619 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ISLR2Q6UXK2 745 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PRSS48Q7RTY5 328 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ZC3HC1Q86WB0 502 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 ARMC8Q8IUR7 673 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SIX6OS1Q8N1H7 587 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 HDAC10Q969S8 669 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PACSIN3Q9UKS6 424 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PCDHGA8Q9Y5G5 932 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SNX13Q9Y5W8 968 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 AKAP6Q13023 2319 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 DPYSL4O14531 572 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PIGNO95427 931 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CHRNGP07510 517 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 GRIK1P39086 918 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ARSFP54793 590 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 FADDQ13158 208 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ACOX1Q15067 660 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 AGAP6Q5VW22 663 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ZNF786Q8N393 782 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 AGAP4Q96P64 663 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CPNE1Q99829 537 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SH3GL1Q99961 368 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BCO2Q9BYV7 579 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 EIF3LQ9Y262 564 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 ZCWPW2A0A1B0GU75 182 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TRIM77I1YAP6 450 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 EI24O14681 340 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 KCNN4O15554 427 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CSPG5O95196 566 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 MATN4O95460 622 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ATN1P54259 1190 aaPredicted RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 KCNQ4P56696 695 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 KRT76Q01546 638 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 EPS8Q12929 822 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BFSP2Q13515 415 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PKDCCQ504Y2 493 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 GALNT18Q6P9A2 607 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 LIX1LQ8IVB5 337 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 DHRS9Q9BPW9 319 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BDH2Q9BUT1 245 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms