RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NR5A2O00482 541 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 NME4O00746 187 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 SDHDO14521 159 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 MICAL2O94851 1124 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 FARP2O94887 1054 aaPredicted RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 BMP4P12644 408 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 GPD1P21695 349 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 TGM1P22735 817 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 MEP1AQ16819 746 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CCDC14Q49A88 953 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 TTC23LQ6PF05 361 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF354CQ86Y25 554 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 TMEM192Q8IY95 271 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 LILRB4Q8NHJ6 448 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CLEC4CQ8WTT0 213 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CNDP2Q96KP4 475 aaKnown RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CGRRF1Q99675 332 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF385DQ9H6B1 395 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 TMEM9Q9P0T7 183 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CNTN6Q9UQ52 1028 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ZFC3H1O60293 1989 aaKnown RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CCRL2O00421 344 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 GCATO75600 419 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ATG7O95352 703 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 NADKO95544 446 aaPredicted RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CHRNB1P11230 501 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 SPNP16150 400 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 GOT1P17174 413 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 FASP25445 335 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ASPAP45381 313 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 USP10Q14694 798 aaKnown RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 GEN1Q17RS7 908 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 FBXO48Q5FWF7 155 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ARHGAP17Q68EM7 881 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 SLC41A1Q8IVJ1 513 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 GLMNQ92990 594 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 NXNL1Q96CM4 212 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 DMRTB1Q96MA1 342 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 PPP1R16BQ96T49 567 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 RBBP8Q99708 897 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 NTPCRQ9BSD7 190 aaKnown RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 EHMT1Q9H9B1 1298 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 TRIM39Q9HCM9 518 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 DPP3Q9NY33 737 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ANKMY1Q9P2S6 941 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ITM2BQ9Y287 266 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CAB39Q9Y376 341 aaPredicted RBP11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 UBDO15205 165 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ACOX3O15254 700 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 NOBOXO60393 691 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 POLBP06746 335 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ALOX5P09917 674 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 BMP2P12643 396 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CNTFP26441 200 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ARPP19P56211 112 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CLDN10P78369 228 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 CTBP1Q13363 440 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 RABL3Q5HYI8 236 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 ANKFN1Q8N957 763 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 KDM1BQ8NB78 822 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 SEPT8Q92599 483 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 LRRC39Q96DD0 335 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 LAMA3Q16787 3333 aa11.35□□□□□ -0.59
SEC61A1-202ENST00000424880 KCNA5P22460 613 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 AXLP30530 894 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF143P52747 638 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 PRKCEQ02156 737 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CBLBQ13191 982 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 GPR162Q16538 588 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 LIPMQ5VYY2 423 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 AKAP14Q86UN6 197 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 RALGPS2Q86X27 583 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TMEM151AQ8N4L1 468 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CNTD1Q8N815 330 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 MCUQ8NE86 351 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TTC16Q8NEE8 873 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 FIG4Q92562 907 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 VPS39Q96JC1 886 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 RMDN3Q96TC7 470 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SMPD3Q9NY59 655 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 DTLQ9NZJ0 730 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SEPT3Q9UH03 358 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TLK1Q9UKI8 766 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TTC34A8MYJ7 566 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SNPHO15079 494 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TBX1O43435 398 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SRP72O76094 671 aaKnown RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 ALDH1A2O94788 518 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 GJB1P08034 283 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 MBL2P11226 248 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CDH1P12830 882 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TCF3P15923 654 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TGM2P21980 687 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SERPINB1P30740 379 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CAPGP40121 348 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms