RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 DUSP10Q9Y6W6 482 aa18.83■□□□□ 0.6
PRNP-202ENST00000424424 TTC24A2A3L6 582 aaPredicted RBP18.82■□□□□ 0.6
PRNP-202ENST00000424424 TRAFD1O14545 582 aaPredicted RBP18.82■□□□□ 0.6
PRNP-202ENST00000424424 GIPC1O14908 333 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 CDKN2BP42772 138 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 NR2C2P49116 596 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 CLDN2P57739 230 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 DYNLT1P63172 113 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 PPIDQ08752 370 aaKnown RBP18.82■□□□□ 0.6
PRNP-202ENST00000424424 PRAMEF14Q5SWL7 426 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 SPOCD1Q6ZMY3 1216 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 DBX2Q6ZNG2 339 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 GCNT7Q6ZNI0 430 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 PTAR1Q7Z6K3 402 aaPredicted RBP18.82■□□□□ 0.6
PRNP-202ENST00000424424 ABI3BPQ7Z7G0 1075 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 SPATS2Q86XZ4 545 aaKnown RBP18.82■□□□□ 0.6
PRNP-202ENST00000424424 NDUFAF2Q8N183 169 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 RHBDD1Q8TEB9 315 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 SEMA3CQ99985 751 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 LACRTQ9GZZ8 138 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 BRD8Q9H0E9 1235 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 TTLL3Q9Y4R7 772 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 PCNX2A6NKB5 2137 aa18.82■□□□□ 0.6
PRNP-202ENST00000424424 CFAP69A5D8W1 941 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 HTRA2O43464 458 aaPredicted RBP18.81■□□□□ 0.6
PRNP-202ENST00000424424 LZTS3O60299 673 aaPredicted RBP18.81■□□□□ 0.6
PRNP-202ENST00000424424 CPP00450 1065 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 ITGAVP06756 1048 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 ADRB1P08588 477 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 MMP12P39900 470 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 GRK6P43250 576 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 RABIFP47224 123 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 RXRGP48443 463 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 IL9RQ01113 521 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 AP1B1Q10567 949 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 ARMC12Q5T9G4 340 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 N4BP2L1Q5TBK1 243 aaPredicted RBP18.81■□□□□ 0.6
PRNP-202ENST00000424424 KAZNQ674X7 775 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 KYAT3Q6YP21 454 aaKnown RBP18.81■□□□□ 0.6
PRNP-202ENST00000424424 Q6ZSR6 202 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 ZSWIM9Q86XI8 627 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 OR13H1Q8NG92 308 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 EXD1Q8NHP7 514 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 BMFQ96LC9 184 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 LGMNQ99538 433 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 KLF6Q99612 283 aaPredicted RBP18.81■□□□□ 0.6
PRNP-202ENST00000424424 PHTF1Q9UMS5 762 aa18.81■□□□□ 0.6
PRNP-202ENST00000424424 KNL1Q8NG31 2342 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CCDC66A2RUB6 948 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 POM121BA6NF01 834 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 RAD51BO15315 384 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CST8O60676 142 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 KRT10P13645 584 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 C6P13671 934 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 TGM2P21980 687 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CA4P22748 312 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CETN2P41208 172 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 LIG3P49916 1009 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 TRIP6Q15654 476 aaKnown RBP18.8■□□□□ 0.6
PRNP-202ENST00000424424 TAZQ16635 292 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 NPNTQ6UXI9 565 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 SYCE1Q8N0S2 351 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 LRRN4Q8WUT4 740 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 SPOCK2Q92563 424 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CENPTQ96BT3 561 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 NSMCE3Q96MG7 304 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CAMK1GQ96NX5 476 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 CDC6Q99741 560 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 DESI2Q9BSY9 194 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 PCOLCE2Q9UKZ9 415 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 PCDHA3Q9Y5H8 950 aa18.8■□□□□ 0.6
PRNP-202ENST00000424424 TDRD6O60522 2096 aaKnown RBP18.8■□□□□ 0.6
PRNP-202ENST00000424424 KCNK1O00180 336 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 TOR1BO14657 336 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 JCHAINP01591 159 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 PRKCGP05129 697 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 ELFN1P0C7U0 828 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 CYP2A6P11509 494 aaPredicted RBP18.79■□□□□ 0.6
PRNP-202ENST00000424424 CTNNA1P35221 906 aaKnown RBP18.79■□□□□ 0.6
PRNP-202ENST00000424424 COPS2P61201 443 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 SIM1P81133 766 aaPredicted RBP18.79■□□□□ 0.6
PRNP-202ENST00000424424 TRAF2Q12933 501 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 PTK2BQ14289 1009 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 LRRC14Q15048 493 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 ALG1LQ6GMV1 187 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 DPPA4Q7L190 304 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.79■□□□□ 0.6
PRNP-202ENST00000424424 CCDC112Q8NEF3 446 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 P3H4Q92791 437 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 IFT43Q96FT9 208 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 OLFM3Q96PB7 478 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 AMFRQ9UKV5 643 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 COQ6Q9Y2Z9 468 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 RAI2Q9Y5P3 530 aa18.79■□□□□ 0.6
PRNP-202ENST00000424424 CABIN1Q9Y6J0 2220 aa18.78■□□□□ 0.6
PRNP-202ENST00000424424 hCG_1818297A0A087WSY0 165 aa18.78■□□□□ 0.6
PRNP-202ENST00000424424 MACROD2A1Z1Q3 448 aa18.78■□□□□ 0.6
PRNP-202ENST00000424424 PGLSO95336 258 aa18.78■□□□□ 0.6
PRNP-202ENST00000424424 HLA-DQB2P05538 268 aa18.78■□□□□ 0.6
PRNP-202ENST00000424424 EPHA8P29322 1005 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms