RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 TMEM9BQ9NQ34 198 aa11.02□□□□□ -0.65
TOP3B-203ENST00000424393 AASDHPPTQ9NRN7 309 aa11.02□□□□□ -0.65
TOP3B-203ENST00000424393 AMACRQ9UHK6 382 aa11.02□□□□□ -0.65
TOP3B-203ENST00000424393 ATP8A1Q9Y2Q0 1164 aa11.02□□□□□ -0.65
TOP3B-203ENST00000424393 PCDHGC4Q9Y5F7 938 aa11.02□□□□□ -0.65
TOP3B-203ENST00000424393 BAHCC1Q9P281 2608 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 IGLON5A6NGN9 336 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 MIF4GDA9UHW6 222 aaKnown RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 NEMP1O14524 444 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 TM4SF5O14894 197 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 VILLO15195 856 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 RAD51BO15315 384 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 MMP20O60882 483 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 SOCS5O75159 536 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 PAK4O96013 591 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 JCHAINP01591 159 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 XPAP23025 273 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 MMP12P39900 470 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 CTSKP43235 329 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 NR2C2P49116 596 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 SUOXP51687 545 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 SEMG2Q02383 582 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 ITKQ08881 620 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 NIPAL4Q0D2K0 466 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 ELP6Q0PNE2 266 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 ZNF211Q13398 564 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 COL9A2Q14055 689 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 PRKD1Q15139 912 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 TEAD4Q15561 434 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 CFAP58Q5T655 872 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 N4BP2L1Q5TBK1 243 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 GCNT7Q6ZNI0 430 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
TOP3B-203ENST00000424393 TMEM145Q8NBT3 493 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 PDLIM2Q96JY6 352 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 CEP41Q9BYV8 373 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 OSBPL8Q9BZF1 889 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 ZDHHC5Q9C0B5 715 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 BRD8Q9H0E9 1235 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 IL21RQ9HBE5 538 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 LZTFL1Q9NQ48 299 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 ANKRD6Q9Y2G4 727 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 PPP2R2CQ9Y2T4 447 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 SNX11Q9Y5W9 270 aa11.01□□□□□ -0.65
TOP3B-203ENST00000424393 H0Y8X5 98 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 APOC4-APOC2K7ER74 178 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 NRDCO43847 1150 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 FZD6O60353 706 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 NEBLO76041 1014 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 CPP00450 1065 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 APOC2P02655 101 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 MMP2P08253 660 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 HNRNPA2B1P22626 353 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 PTPN3P26045 913 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 ATXN3P54252 364 aaPredicted RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 RALGDSQ12967 914 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 NOMO1Q15155 1222 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 HLA-BQ31612 363 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 UAP1L1Q3KQV9 507 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 BZW1Q7L1Q6 419 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 ADAT2Q7Z6V5 191 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 ZC3H18Q86VM9 953 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 ZSCAN30Q86W11 494 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 UBL4BQ8N7F7 174 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 MFSD2AQ8NA29 543 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 CXorf40AQ8TE69 158 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 PDCD6IPQ8WUM4 868 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 TFB1MQ8WVM0 346 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 ASB12Q8WXK4 309 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 P3H4Q92791 437 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 QKIQ96PU8 341 aaKnown RBP eCLIP11□□□□□ -0.652e-9■■■■□ 20.2
TOP3B-203ENST00000424393 KLF6Q99612 283 aaPredicted RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 WRAP53Q9BUR4 548 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 KCNF1Q9H3M0 494 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 GAREM1Q9H706 876 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 DNAAF2Q9NVR5 837 aaKnown RBP11□□□□□ -0.65
TOP3B-203ENST00000424393 SEPT10Q9P0V9 454 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 PCDHB9Q9Y5E1 797 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 RAI2Q9Y5P3 530 aa11□□□□□ -0.65
TOP3B-203ENST00000424393 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 A0A1W2PQ67 120 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 TLR4O00206 839 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 KCNK3O14649 394 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 OPHN1O60890 802 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 TM7SF2O76062 418 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 PGLSO95336 258 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 CER1O95813 267 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 PDHA1P08559 390 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 CES1P23141 567 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 AKT2P31751 481 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 LIG3P49916 1009 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 C21orf59P57076 290 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 CLDN2P57739 230 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 NXPH1P58417 271 aa10.99□□□□□ -0.65
TOP3B-203ENST00000424393 POLR2LP62875 67 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms