RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ZFXP17010 805 aaPredicted RBP26.59■■□□□ 1.85
CDK9-202ENST00000421939 VAV2P52735 878 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 POLR2LP62875 67 aaKnown RBP26.59■■□□□ 1.85
CDK9-202ENST00000421939 TRIP6Q15654 476 aaKnown RBP26.59■■□□□ 1.85
CDK9-202ENST00000421939 Q6ZSR6 202 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 DAAM2Q86T65 1068 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 CCNYQ8ND76 341 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 BAHD1Q8TBE0 780 aaPredicted RBP26.59■■□□□ 1.85
CDK9-202ENST00000421939 RHBDD1Q8TEB9 315 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 SPOCK2Q92563 424 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 CALR3Q96L12 384 aaKnown RBP26.59■■□□□ 1.85
CDK9-202ENST00000421939 POLR1EQ9GZS1 481 aaKnown RBP26.59■■□□□ 1.85
CDK9-202ENST00000421939 GPR27Q9NS67 375 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 HAUS2Q9NVX0 235 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 PCDHGC4Q9Y5F7 938 aa26.59■■□□□ 1.85
CDK9-202ENST00000421939 A0A1W2PQ67 120 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 BTNL10A8MVZ5 291 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 C6P13671 934 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 PMLP29590 882 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 CDKN2BP42772 138 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 RABIFP47224 123 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 TAZQ16635 292 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 GATAD2AQ86YP4 633 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 CCDC13Q8IYE1 715 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 SLC22A18ASQ8N1D0 253 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 SAP25Q8TEE9 199 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 LRRN4Q8WUT4 740 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 SEMA3CQ99985 751 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 RBM22Q9NW64 420 aaKnown RBP eCLIP26.58■■□□□ 1.85
CDK9-202ENST00000421939 AMACRQ9UHK6 382 aa26.58■■□□□ 1.85
CDK9-202ENST00000421939 NEBLO76041 1014 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 CPP00450 1065 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 ITGAVP06756 1048 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 CCNB1P14635 433 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 MARCKSL1P49006 195 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 LIG3P49916 1009 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 DYNLT1P63172 113 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 SEMG2Q02383 582 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 PPIDQ08752 370 aaKnown RBP26.57■■□□□ 1.84
CDK9-202ENST00000421939 ITKQ08881 620 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 TRAF2Q12933 501 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 RALGDSQ12967 914 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 ALG1LQ6GMV1 187 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 KIAA1328Q86T90 577 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 DCP2Q8IU60 420 aaKnown RBP26.57■■□□□ 1.84
CDK9-202ENST00000421939 KATNAL2Q8IYT4 538 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 PDCD6IPQ8WUM4 868 aaKnown RBP26.57■■□□□ 1.84
CDK9-202ENST00000421939 CENPTQ96BT3 561 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 LGMNQ99538 433 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 CDC6Q99741 560 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 LACRTQ9GZZ8 138 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 COQ6Q9Y2Z9 468 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 TTLL3Q9Y4R7 772 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 DUSP10Q9Y6W6 482 aa26.57■■□□□ 1.84
CDK9-202ENST00000421939 PJA2O43164 708 aa26.56■■□□□ 1.84
CDK9-202ENST00000421939 IGFALSP35858 605 aa26.56■■□□□ 1.84
CDK9-202ENST00000421939 SPOCD1Q6ZMY3 1216 aa26.56■■□□□ 1.84
CDK9-202ENST00000421939 DPPA4Q7L190 304 aa26.56■■□□□ 1.84
CDK9-202ENST00000421939 GLRX5Q86SX6 157 aa26.56■■□□□ 1.84
CDK9-202ENST00000421939 TP53I13Q8NBR0 393 aaPredicted RBP26.56■■□□□ 1.84
CDK9-202ENST00000421939 OLFM3Q96PB7 478 aa26.56■■□□□ 1.84
CDK9-202ENST00000421939 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.56■■□□□ 1.84
CDK9-202ENST00000421939 NAP1L1P55209 391 aaKnown RBP26.55■■□□□ 1.84
CDK9-202ENST00000421939 PFN3P60673 137 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 TFDP2Q14188 446 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 PDK1Q15118 436 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 IRF4Q15306 451 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 NPNTQ6UXI9 565 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 KDM7AQ6ZMT4 941 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 KRT35Q92764 455 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 LRRK1Q38SD2 2015 aa26.55■■□□□ 1.84
CDK9-202ENST00000421939 CFAP69A5D8W1 941 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 KCNK1O00180 336 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 PPP1R12AO14974 1030 aaPredicted RBP26.54■■□□□ 1.84
CDK9-202ENST00000421939 LZTS3O60299 673 aaPredicted RBP26.54■■□□□ 1.84
CDK9-202ENST00000421939 ZRANB2O95218 330 aaKnown RBP eCLIP26.54■■□□□ 1.84
CDK9-202ENST00000421939 PGLSO95336 258 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 HLA-DQB2P05538 268 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 IFI35P80217 286 aaPredicted RBP26.54■■□□□ 1.84
CDK9-202ENST00000421939 DSC2Q02487 901 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 IFT43Q96FT9 208 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 RBM41Q96IZ5 413 aaKnown RBP26.54■■□□□ 1.84
CDK9-202ENST00000421939 DESI2Q9BSY9 194 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 B4GALT6Q9UBX8 382 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 RAI2Q9Y5P3 530 aa26.54■■□□□ 1.84
CDK9-202ENST00000421939 SDC3O75056 442 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 ELFN1P0C7U0 828 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 KRT10P13645 584 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 CES1P23141 567 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 GSDMDP57764 484 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 AP1B1Q10567 949 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 FOXC1Q12948 553 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 BNIP3Q12983 259 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 PDE1CQ14123 709 aaPredicted RBP26.53■■□□□ 1.84
CDK9-202ENST00000421939 LRRC14Q15048 493 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 AGERQ15109 404 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 TFDP3Q5H9I0 405 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 ARMC12Q5T9G4 340 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 KAZNQ674X7 775 aa26.53■■□□□ 1.84
CDK9-202ENST00000421939 KANSL1Q7Z3B3 1105 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms