RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 PPP1R16AQ96I34 528 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 GPR22Q99680 433 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 OSBPL1AQ9BXW6 950 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TRIM54Q9BYV2 358 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ALG13Q9NP73 1137 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 ANLNQ9NQW6 1124 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 OBP2AQ9NY56 170 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 EURLQ9NYK6 297 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 TRMT6Q9UJA5 497 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 LOC285095A0A1B0GVY8 99 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 UBA6A0AVT1 1052 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 LINC01553A4QN01 128 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CD3EAPO15446 510 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 EDF1O60869 148 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 RHOBTB1O94844 696 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 KLHL2O95198 593 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 STAMBPO95630 424 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 NMBRP28336 390 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 NEK3P51956 506 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 PLK1P53350 603 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CRY1Q16526 586 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ZRANB3Q5FWF4 1079 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 SIRPB2Q5JXA9 342 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TPGS1Q6ZTW0 290 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CIR1Q86X95 450 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 CNTN4Q8IWV2 1026 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 RIPOR3Q96MK2 946 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ZNF641Q96N77 438 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 VN1R3Q9BXE9 311 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 MRPL46Q9H2W6 279 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 GPAMQ9HCL2 828 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 KCNK4Q9NYG8 393 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 BCAP29Q9UHQ4 241 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 RUVBL2Q9Y230 463 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 FRMPD3Q5JV73 1810 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TRAFD1O14545 582 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 KPNA5O15131 536 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 SNX2O60749 519 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 BPGMP07738 259 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TPBGLP0DKB5 382 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 PABPC1P11940 636 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 EN2P19622 333 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 GRIA1P42261 906 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TRMT10BQ6PF06 316 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 C2CD4AQ8NCU7 369 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 ARNTL2Q8WYA1 636 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TIFAQ96CG3 184 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 MFSD3Q96ES6 412 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CLPBQ9H078 707 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ILKAPQ9H0C8 392 aaPredicted RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 NCKIPSDQ9NZQ3 722 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CRLS1Q9UJA2 301 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ZFP69BQ9UJL9 534 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 TRPC5OSA6NMA1 111 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 CLASP2O75122 1294 aaKnown RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 WEE1P30291 646 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 SUOXP51687 545 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 EPHA5P54756 1037 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 ERVK-21P61565 698 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 CACNG1Q06432 222 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 CES3Q6UWW8 571 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PTAR1Q7Z6K3 402 aaPredicted RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 PRPF39Q86UA1 669 aaKnown RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 IRF7Q92985 503 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PANX3Q96QZ0 392 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 TRMOQ9BU70 441 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 HAUS5O94927 633 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 VNN2O95498 520 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 SLC6A4P31645 630 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 CLCN4P51793 760 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PRKAA1Q13131 559 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PLEKHG6Q3KR16 790 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 SPDYAQ5MJ70 313 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 ATAT1Q5SQI0 421 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PTRHD1Q6GMV3 140 aaKnown RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 NETO2Q8NC67 525 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 OR2AP1Q8NGE2 309 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 HDAC10Q969S8 669 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 MAGEE1Q9HCI5 957 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PRM3Q9NNZ6 103 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 SMYD2Q9NRG4 433 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 NLE1Q9NVX2 485 aaPredicted RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 DUS2Q9NX74 493 aaKnown RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 VWA7Q9Y334 891 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 SIN3BO75182 1162 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 SRPRAP08240 638 aaKnown RBP8.43□□□□□ -1.06
USP54-203ENST00000418501 FSHRP23945 695 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 MAPK9P45984 424 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 TEAD2Q15562 447 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 GPR33Q49SQ1 333 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 CARD16Q5EG05 197 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 FSTL4Q6MZW2 842 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 Q6ZNB5 142 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 PIGWQ7Z7B1 504 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 FAM217AQ8IXS0 508 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 GPR150Q8NGU9 434 aa8.43□□□□□ -1.06
USP54-203ENST00000418501 DENND1AQ8TEH3 1009 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms