RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MKRN2Q9H000 416 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 BTBD1Q9H0C5 482 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 L2HGDHQ9H9P8 463 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 ANAPC5Q9UJX4 755 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PPM1HQ9ULR3 514 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PHTF1Q9UMS5 762 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 CYP8B1Q9UNU6 501 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 RPL26L1Q9UNX3 145 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SNX24Q9Y343 169 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 TECTAO75443 2155 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3DA0A087WVF3 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3IA0A087WXS9 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3EA0A087X179 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3KA0A087X1G2 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3FA6NER0 549 aaPredicted RBP8.52□□□□□ -1.05
TRIM48-201ENST00000417545 LRRC72A6NJI9 287 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3LB9A6J9 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 SMAPO00193 183 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 PLK4O00444 970 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 USP12O75317 370 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 AGTP01019 485 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 MMP2P08253 660 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 ELFN1P0C7U0 828 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3HP0C7X1 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 ADRB3P13945 408 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TPSB2P20231 275 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 AVPR2P30518 371 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 P2RY2P41231 377 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 CDK16Q00536 496 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 CNTN1Q12860 1018 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 CDH17Q12864 832 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TPSAB1Q15661 275 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 LRRC73Q5JTD7 316 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 DENND2CQ68D51 928 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3GQ6DHY5 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3CQ6IPX1 549 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 CASC4Q6P4E1 433 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TSSK4Q6SA08 328 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 USP30Q70CQ3 517 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 PRPF39Q86UA1 669 aaKnown RBP8.52□□□□□ -1.05
TRIM48-201ENST00000417545 TBC1D3Q8IZP1 549 aaPredicted RBP8.52□□□□□ -1.05
TRIM48-201ENST00000417545 NOA1Q8NC60 698 aaKnown RBP8.52□□□□□ -1.05
TRIM48-201ENST00000417545 BLOC1S5Q8TDH9 187 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 SNX19Q92543 992 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 UBXN4Q92575 508 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 MRGPRX2Q96LB1 330 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 GPR63Q9BZJ6 419 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 EIF2B3Q9NR50 452 aaKnown RBP8.52□□□□□ -1.05
TRIM48-201ENST00000417545 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 DKK3Q9UBP4 350 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 SARDHQ9UL12 918 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 FZD4Q9ULV1 537 aa8.52□□□□□ -1.05
TRIM48-201ENST00000417545 KMT2EQ8IZD2 1858 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 CAPN8A6NHC0 703 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 MEI4A8MW99 385 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 A8MX80 341 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 GOLGA8MH3BSY2 632 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SLC7A4O43246 635 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 HTRA2O43464 458 aaPredicted RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 PAPSS2O95340 614 aaPredicted RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 CRTAMO95727 393 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 PRKCGP05129 697 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 ITIH2P19823 946 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 VIPR1P32241 457 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 ABL2P42684 1182 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 FNTBP49356 437 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 TPMTP51580 245 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 ITGA8P53708 1063 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SESN2P58004 480 aaPredicted RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 CAV1Q03135 178 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 LAMB3Q13751 1172 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 MORF4L2Q15014 288 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SLC1A5Q15758 541 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 UGP2Q16851 508 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 KCTD19Q17RG1 926 aaPredicted RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 DNAJC21Q5F1R6 531 aaKnown RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SIRPB2Q5JXA9 342 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 KDELC1Q6UW63 502 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SLC36A4Q6YBV0 504 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 CEP68Q76N32 757 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 GLT6D1Q7Z4J2 308 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 HOOK3Q86VS8 718 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 IFT20Q8IY31 132 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 AADATQ8N5Z0 425 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 PPHLN1Q8NEY8 458 aaKnown RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 OR52K1Q8NGK4 314 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 IFT81Q8WYA0 676 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 WRAP53Q9BUR4 548 aaKnown RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 C1QTNF7Q9BXJ2 289 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 FRMD8Q9BZ67 464 aaPredicted RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SGK2Q9HBY8 427 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 EPB41L5Q9HCM4 733 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 XAB2Q9HCS7 855 aaKnown RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 C2orf42Q9NWW7 574 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 BFARQ9NZS9 450 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms