RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 COL9A2Q14055 689 aaPredicted RBP16.52■□□□□ 0.23
DDR1-231ENST00000417521 DPYSL3Q14195 570 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 LRRC73Q5JTD7 316 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 CFAP58Q5T655 872 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 ERAP2Q6P179 960 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 ZNF662Q6ZS27 426 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 BBS5Q8N3I7 341 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 ATPAF2Q8N5M1 289 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 KCTD6Q8NC69 237 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 CENPTQ96BT3 561 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 ECHDC3Q96DC8 303 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 ZNF670Q9BS34 389 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 C1QTNF7Q9BXJ2 289 aa16.52■□□□□ 0.23
DDR1-231ENST00000417521 SPTY2D1-AS1A0A0U1RR47 76 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 RIOK3O14730 519 aaKnown RBP16.51■□□□□ 0.23
DDR1-231ENST00000417521 LDOC1O95751 146 aaPredicted RBP16.51■□□□□ 0.23
DDR1-231ENST00000417521 CD48P09326 243 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 ITIH2P19823 946 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 SCNN1BP51168 640 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 PFN3P60673 137 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 POLR2LP62875 67 aaKnown RBP16.51■□□□□ 0.23
DDR1-231ENST00000417521 MMRN1Q13201 1228 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 ZNF235Q14590 738 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 PTAR1Q7Z6K3 402 aaPredicted RBP16.51■□□□□ 0.23
DDR1-231ENST00000417521 REXO1L1PQ8IX06 675 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 SLC22A18ASQ8N1D0 253 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 EID2Q8N6I1 236 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 CALR3Q96L12 384 aaKnown RBP16.51■□□□□ 0.23
DDR1-231ENST00000417521 PCDH12Q9NPG4 1184 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
DDR1-231ENST00000417521 KLK13Q9UKR3 277 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 ATRXP46100 2492 aa16.51■□□□□ 0.23
DDR1-231ENST00000417521 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 TRAFD1O14545 582 aaPredicted RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 TOR1BO14657 336 aa16.5■□□□□ 0.23
DDR1-231ENST00000417521 PAFAH1B3Q15102 231 aaKnown RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 MARC1Q5VT66 337 aa16.5■□□□□ 0.23
DDR1-231ENST00000417521 ZSWIM9Q86XI8 627 aa16.5■□□□□ 0.23
DDR1-231ENST00000417521 RNF10Q8N5U6 811 aaKnown RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 PCDH19Q8TAB3 1148 aa16.5■□□□□ 0.23
DDR1-231ENST00000417521 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
DDR1-231ENST00000417521 CNDP2Q96KP4 475 aaKnown RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 WRAP53Q9BUR4 548 aaKnown RBP16.5■□□□□ 0.23
DDR1-231ENST00000417521 ATP8A1Q9Y2Q0 1164 aa16.5■□□□□ 0.23
DDR1-231ENST00000417521 NYNRINQ9P2P1 1898 aaKnown RBP16.49■□□□□ 0.23
DDR1-231ENST00000417521 A0A1W2PQ67 120 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 CFAP69A5D8W1 941 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 USP27XA6NNY8 438 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 ENC1O14682 589 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 ZSCAN12O43309 604 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 CR2P20023 1033 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 DGKAP23743 735 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 MARCKSL1P49006 195 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 HNRNPKP61978 463 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDR1-231ENST00000417521 YPEL5P62699 121 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 FZD2Q14332 565 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 AGERQ15109 404 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 RALGPS1Q5JS13 557 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 ZFYVE27Q5T4F4 411 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 UNQ6494/PRO21346Q6UXR6 183 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 RHOT1Q8IXI2 618 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 SLC25A45Q8N413 288 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 FAF2Q96CS3 445 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 NUDCD1Q96RS6 583 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 TMEM121BQ9BXQ6 578 aaPredicted RBP16.49■□□□□ 0.23
DDR1-231ENST00000417521 PCDHGA1Q9Y5H4 931 aa16.49■□□□□ 0.23
DDR1-231ENST00000417521 GOLGA8CPA6NN73 597 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 SDC3O75056 442 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 SOCS5O75159 536 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 PIAS2O75928 621 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 FTCDO95954 541 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 CSF2P04141 144 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 PROS1P07225 676 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 C1SP09871 688 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 CDK4P11802 303 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 KDELR1P24390 212 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 MMP12P39900 470 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 GALNT2Q10471 571 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 PDE1CQ14123 709 aaPredicted RBP16.48■□□□□ 0.23
DDR1-231ENST00000417521 NCBP2-AS2Q69YL0 99 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 NT5DC3Q86UY8 548 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 PARGQ86W56 976 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 TP53I13Q8NBR0 393 aaPredicted RBP16.48■□□□□ 0.23
DDR1-231ENST00000417521 KRT35Q92764 455 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 GATA6Q92908 595 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 NSMCE3Q96MG7 304 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 MGME1Q9BQP7 344 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 PLXNA2O75051 1894 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 CHD6Q8TD26 2715 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 ZNF487B1APH4 448 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 C1QTNF9BB2RNN3 333 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 HTRA2O43464 458 aaPredicted RBP16.48■□□□□ 0.23
DDR1-231ENST00000417521 MFSD11O43934 449 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 C1QTNF9P0C862 333 aa16.48■□□□□ 0.23
DDR1-231ENST00000417521 C6P13671 934 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms