RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 INPP5AQ14642 412 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 NFATC4Q14934 902 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 TCEA2Q15560 299 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 STX1AQ16623 288 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 ARHGAP40Q5TG30 622 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 LVRNQ6Q4G3 990 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 ENPP7Q6UWV6 458 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 RD3Q7Z3Z2 195 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 CAMK1DQ8IU85 385 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 ARL14Q8N4G2 192 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 KYQ8NBH2 561 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 ATL2Q8NHH9 583 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 WDR36Q8NI36 951 aaKnown RBP14.55□□□□□ -0.08
PAF1-202ENST00000416728 TSACCQ96A04 125 aaPredicted RBP14.55□□□□□ -0.08
PAF1-202ENST00000416728 CCDC97Q96F63 343 aaPredicted RBP14.55□□□□□ -0.08
PAF1-202ENST00000416728 CELF6Q96J87 481 aaKnown RBP14.55□□□□□ -0.08
PAF1-202ENST00000416728 APOOQ9BUR5 198 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 EDEM3Q9BZQ6 932 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 DHX35Q9H5Z1 703 aaKnown RBP14.55□□□□□ -0.08
PAF1-202ENST00000416728 SIRPGQ9P1W8 387 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 AP4E1Q9UPM8 1137 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 ATP8A1Q9Y2Q0 1164 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 OR1A2Q9Y585 309 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 CCDC187A0A096LP49 1063 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 ARHGAP42A6NI28 874 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 EIF3CLB5ME19 914 aaKnown RBP14.54□□□□□ -0.08
PAF1-202ENST00000416728 EEF2KO00418 725 aaKnown RBP14.54□□□□□ -0.08
PAF1-202ENST00000416728 PCCBP05166 539 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 PSMA2P25787 234 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 SERPINA4P29622 427 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 MMP12P39900 470 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 MLLT3P42568 568 aaPredicted RBP14.54□□□□□ -0.08
PAF1-202ENST00000416728 PDX1P52945 283 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 SRP54P61011 504 aaKnown RBP14.54□□□□□ -0.08
PAF1-202ENST00000416728 AGERQ15109 404 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 PPP1R2P3Q6NXS1 205 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 GKN2Q86XP6 184 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 SDR16C5Q8N3Y7 309 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 ZNF843Q8N446 348 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 PAF1Q8N7H5 531 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 PRR11Q96HE9 360 aaPredicted RBP14.54□□□□□ -0.08
PAF1-202ENST00000416728 WDR92Q96MX6 357 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 EIF3CQ99613 913 aaKnown RBP14.54□□□□□ -0.08
PAF1-202ENST00000416728 SLC39A8Q9C0K1 460 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 ATP13A3Q9H7F0 1226 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 PARVAQ9NVD7 372 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 KLQ9UEF7 1012 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
PAF1-202ENST00000416728 CDRT15L2A8MXV6 281 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 NTN3O00634 580 aaPredicted RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 CASC3O15234 703 aaKnown RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 DAPK3O43293 454 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 BUB1BO60566 1050 aaPredicted RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 PALMO75781 387 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 TNFSF15O95150 251 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 PRKCGP05129 697 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 TNFAIP3P21580 790 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 RGRP47804 291 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 CSNK1DP48730 415 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 PAPOLAP51003 745 aaKnown RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 CFHR1Q03591 330 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 VAC14Q08AM6 782 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 MAMLD1Q13495 774 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 MTM1Q13496 603 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 PCSK4Q6UW60 755 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 APTXQ7Z2E3 356 aaKnown RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 SRLQ86TD4 932 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 ZSWIM9Q86XI8 627 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 TSEN2Q8NCE0 465 aaKnown RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 CCDC74AQ96AQ1 378 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 CINPQ9BW66 212 aaPredicted RBP14.53□□□□□ -0.08
PAF1-202ENST00000416728 SP110Q9HB58 689 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 TAS2R14Q9NYV8 317 aa14.53□□□□□ -0.08
PAF1-202ENST00000416728 PMS2P1A4D2B8 440 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 CFAP69A5D8W1 941 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 CAPN8A6NHC0 703 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 TMCO5BA8MYB1 307 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 ITGA2BP08514 1039 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 SKOR1P84550 965 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 BCL2L1Q07817 233 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 CA9Q16790 459 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 ERMARDQ5T6L9 678 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 RFX8Q6ZV50 586 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 IRF2BP2Q7Z5L9 587 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 CLEC14AQ86T13 490 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 ZNF605Q86T29 641 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 OR6C4Q8NGE1 309 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 WBP1Q96G27 269 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 PDXPQ96GD0 296 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 LIN37Q96GY3 246 aaPredicted RBP14.52□□□□□ -0.08
PAF1-202ENST00000416728 GBP4Q96PP9 640 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 GFM1Q96RP9 751 aaKnown RBP14.52□□□□□ -0.08
PAF1-202ENST00000416728 SNRNP25Q9BV90 132 aaKnown RBP14.52□□□□□ -0.08
PAF1-202ENST00000416728 PCSK1NQ9UHG2 260 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 RABGEF1Q9UJ41 708 aa14.52□□□□□ -0.08
PAF1-202ENST00000416728 D6RAR5 112 aa14.51□□□□□ -0.09
PAF1-202ENST00000416728 DFFAO00273 331 aa14.51□□□□□ -0.09
PAF1-202ENST00000416728 CACNB4O00305 520 aaPredicted RBP14.51□□□□□ -0.09
PAF1-202ENST00000416728 PLD2O14939 933 aa14.51□□□□□ -0.09
PAF1-202ENST00000416728 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms