RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 CAAP1Q9H8G2 361 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 ENTPD7Q9NQZ7 604 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 IPO11Q9UI26 975 aaKnown RBP18.12■□□□□ 0.49
SCARB1-203ENST00000415380 CROTQ9UKG9 612 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 H3BNH8 94 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 MATN3O15232 486 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 SRP72O76094 671 aaKnown RBP18.12■□□□□ 0.49
SCARB1-203ENST00000415380 HLA-DQB2P05538 268 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 LHX1P48742 406 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 AGAP9Q5VTM2 703 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 DQX1Q8TE96 717 aaKnown RBP18.12■□□□□ 0.49
SCARB1-203ENST00000415380 MRGPRX2Q96LB1 330 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 SLC25A23Q9BV35 468 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 SLC39A8Q9C0K1 460 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 GALNT8Q9NY28 637 aa18.12■□□□□ 0.49
SCARB1-203ENST00000415380 MEIS3P2A8K0S8 358 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 DYNC1LI2O43237 492 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 NRP2O60462 931 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 MT-CO1P00395 513 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 F2P00734 622 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 CCDC166P0CW27 439 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 YWHAQP27348 245 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 NOMO2Q5JPE7 1267 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 FAM45BPQ6NSW5 357 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 C8orf82Q6P1X6 216 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 KLC3Q6P597 504 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 DPP9Q86TI2 863 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 PNPLA1Q8N8W4 532 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 RIN3Q8TB24 985 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 FAM45AQ8TCE6 357 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 PBXIP1Q96AQ6 731 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 SMARCD1Q96GM5 515 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 OLAHQ9NV23 265 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 GMPR2Q9P2T1 348 aaKnown RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 RSL24D1Q9UHA3 163 aaKnown RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 MYRFQ9Y2G1 1151 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 PTCH2Q9Y6C5 1203 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 PLOD2O00469 737 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 UBFD1O14562 309 aaKnown RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 TREHO43280 583 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 HTRA2O43464 458 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 LTA4HP09960 611 aaKnown RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 ALDH3B2P48448 385 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 SAMD4BQ5PRF9 694 aaKnown RBP18.11■□□□□ 0.49
SCARB1-203ENST00000415380 CLEC6AQ6EIG7 209 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 RANBP10Q6VN20 620 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 MAML3Q96JK9 1138 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 SLC39A3Q9BRY0 314 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 RBM22Q9NW64 420 aaKnown RBP eCLIP18.11■□□□□ 0.492e-16■■■■■ 75.9
SCARB1-203ENST00000415380 TRAF6Q9Y4K3 522 aa18.11■□□□□ 0.49
SCARB1-203ENST00000415380 ZNF839A8K0R7 811 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 TIPRLO75663 272 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 CKMT2P17540 419 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 PITRM1Q5JRX3 1037 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 KRT80Q6KB66 452 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 CYHR1Q6ZMK1 362 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 GAB3Q8WWW8 586 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 PPWD1Q96BP3 646 aaKnown RBP18.1■□□□□ 0.49
SCARB1-203ENST00000415380 RANBP9Q96S59 729 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 GSTO2Q9H4Y5 243 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 PNPLA3Q9NST1 481 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 NDFIP2Q9NV92 336 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 SLC7A2P52569 658 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 IQSEC1Q6DN90 963 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 KIAA0408Q6ZU52 694 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 DHFR2Q86XF0 187 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 TMEM86AQ8N2M4 240 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 FAM110BQ8TC76 370 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 ANKRD49Q8WVL7 239 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 EFHD1Q9BUP0 239 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 FBRSL1Q9HCM7 1045 aaKnown RBP18.1■□□□□ 0.49
SCARB1-203ENST00000415380 CDH9Q9ULB4 789 aa18.1■□□□□ 0.49
SCARB1-203ENST00000415380 ATP6AP2A0A1C7CYW4 349 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 ATP6AP2O75787 350 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 RBP1P09455 135 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 TSPAN8P19075 237 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 CLCNKBP51801 687 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 PCSK7Q16549 785 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 HACD2Q6Y1H2 254 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 ZBTB49Q6ZSB9 765 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 IRGQQ8WZA9 623 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 RMND5BQ96G75 393 aaPredicted RBP18.09■□□□□ 0.49
SCARB1-203ENST00000415380 PRKD2Q9BZL6 878 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 ABHD16BQ9H3Z7 469 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 DUS2Q9NX74 493 aaKnown RBP18.09■□□□□ 0.49
SCARB1-203ENST00000415380 CDK9P50750 372 aaKnown RBP18.09■□□□□ 0.49
SCARB1-203ENST00000415380 AFF1P51825 1210 aaKnown RBP18.09■□□□□ 0.49
SCARB1-203ENST00000415380 NDST2P52849 883 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 ADAM17P78536 824 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 GALNT1Q10472 559 aaPredicted RBP18.09■□□□□ 0.49
SCARB1-203ENST00000415380 MFSD10Q14728 455 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 LARP4Q71RC2 724 aaKnown RBP eCLIP18.09■□□□□ 0.498e-9■□□□□ 10.2
SCARB1-203ENST00000415380 ANKFN1Q8N957 763 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 C3orf58Q8NDZ4 430 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 MYLPFQ96A32 169 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 TINF2Q9BSI4 451 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 ANKRD60Q9BZ19 345 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 CSNK1G1Q9HCP0 422 aa18.09■□□□□ 0.49
SCARB1-203ENST00000415380 IRAK4Q9NWZ3 460 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms